UCSC Mouse Gene Sorter

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UCSC Mouse Gene Sorter

genome assembly search

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#	Name	VisiGene	BLASTP E-Value	Genome Position	Description
1	Atg16l1	173588	0	chr1 87,774,220	Mus musculus autophagy related 16-like 1 (S. cerevisiae) (Atg16l1), transcript variant 2, mRNA. (from RefSeq NM_029846)
2	Atg16l2	183083	6e-98	chr7 101,293,704	Mus musculus autophagy related 16-like 2 (S. cerevisiae) (Atg16l2), transcript variant 1, mRNA. (from RefSeq NM_001111111)
3	Snrnp40	182696	6e-31	chr4 130,375,079	Mus musculus small nuclear ribonucleoprotein 40 (U5) (Snrnp40), mRNA. (from RefSeq NM_025645)
4	Poc1a	183092	2e-27	chr9 106,315,791	Mus musculus POC1 centriolar protein A (Poc1a), mRNA. (from RefSeq NM_027354)
5	Poc1b	183536	1e-25	chr10 99,152,512	Mus musculus POC1 centriolar protein B (Poc1b), transcript variant 1, mRNA. (from RefSeq NM_027740)
6	Wdr5	188597	3e-23	chr2 27,525,846	Mus musculus WD repeat domain 5 (Wdr5), mRNA. (from RefSeq NM_080848)
7	Wdr5b	188596	4e-23	chr16 36,042,559	Mus musculus WD repeat domain 5B (Wdr5b), mRNA. (from RefSeq NM_027113)
8	Daw1	183437	6e-22	chr1 83,185,177	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. (from UniProt D3Z7A5)
9	Spag16	188027	9e-19	chr1 70,276,060	Mus musculus sperm associated antigen 16 (Spag16), transcript variant 1, mRNA. (from RefSeq NM_029160)
10	Katnb1	177406	2e-18	chr8 95,090,698	Mus musculus katanin p80 (WD40-containing) subunit B 1 (Katnb1), mRNA. (from RefSeq NM_028805)
11	Tbl3	188191	3e-18	chr17 24,702,804	Mus musculus transducin (beta)-like 3 (Tbl3), mRNA. (from RefSeq NM_145396)
12	Pafah1b1	179458	4e-17	chr11 74,699,309	Mus musculus platelet-activating factor acetylhydrolase, isoform 1b, subunit 1 (Pafah1b1), transcript variant 1, mRNA. (from RefSeq NM_013625)
13	Smu1	162002	1e-16	chr4 40,747,232	Mus musculus smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) (Smu1), mRNA. (from RefSeq NM_021535)
14	Tbl1x	188190	0.000000000000001	chrX 77,586,998	Mus musculus transducin (beta)-like 1 X-linked (Tbl1x), mRNA. (from RefSeq NM_020601)
15	Fbxw7	1779	0.000000000000002	chr3 84,964,895	Mus musculus F-box and WD-40 domain protein 7 (Fbxw7), transcript variant 3, mRNA. (from RefSeq NM_080428)
16	Wdr47	182965	0.000000000000002	chr3 108,618,499	Mus musculus WD repeat domain 47 (Wdr47), transcript variant 1, mRNA. (from RefSeq NM_181400)
17	Tbl1xr1	188189	0.000000000000003	chr3 22,146,623	F-box-like protein involved in the recruitment of the ubiquitin/19S proteasome complex to nuclear receptor-regulated transcription units. Plays an essential role in transcription activation mediated by nuclear receptors. Probably acts as integral component of the N-Cor corepressor complex that mediates the recruitment of the 19S proteasome complex, leading to the subsequent proteasomal degradation of N-Cor complex, thereby allowing cofactor exchange, and transcription activation (By similarity). (from UniProt Q8BHJ5)
18	Wdr38	n/a	0.00000000000001	chr2 38,999,950	Mus musculus WD repeat domain 38 (Wdr38), mRNA. (from RefSeq NM_029687)
19	Cdc40	184716	0.00000000000001	chr10 40,857,466	Mus musculus cell division cycle 40 (Cdc40), mRNA. (from RefSeq NM_027879)
20	Taf5l	188168	0.00000000000003	chr8 124,008,857	Mus musculus TATA-box binding protein associated factor 5 like (Taf5l), transcript variant 1, mRNA. (from RefSeq NM_133966)
21	Taf5	181401	0.00000000000006	chr19 47,075,612	Mus musculus TATA-box binding protein associated factor 5 (Taf5), mRNA. (from RefSeq NM_177342)
22	Ahi1	173341	0.0000000000001	chr10 21,016,488	Mus musculus Abelson helper integration site 1 (Ahi1), transcript variant 1, mRNA. (from RefSeq NM_026203)
23	Apaf1	173572	0.0000000000002	chr10 91,036,044	Mus musculus apoptotic peptidase activating factor 1 (Apaf1), transcript variant 1, mRNA. (from RefSeq NM_001042558)
24	Plrg1	187467	0.0000000000002	chr3 83,063,938	Mus musculus pleiotropic regulator 1 (Plrg1), mRNA. (from RefSeq NM_016784)
25	Gnb2	176673	0.0000000000004	chr5 137,530,818	Mus musculus guanine nucleotide binding protein (G protein), beta 2 (Gnb2), mRNA. (from RefSeq NM_010312)
26	Rack1	176674	0.000000000002	chr11 48,803,397	Mus musculus receptor for activated C kinase 1 (Rack1), mRNA. (from RefSeq NM_008143)
27	Copa	175086	0.000000000002	chr1 172,102,427	Mus musculus coatomer protein complex subunit alpha (Copa), mRNA. (from RefSeq NM_009938)
28	Wdr83	171117	0.000000000002	chr8 85,077,890	Mus musculus WD repeat domain containing 83 (Wdr83), mRNA. (from RefSeq NM_026399)
29	Prpf4	n/a	0.000000000002	chr4 62,417,893	Mus musculus pre-mRNA processing factor 4 (Prpf4), mRNA. (from RefSeq NM_027297)
30	Wdr37	182436	0.000000000003	chr13 8,837,349	Mus musculus WD repeat domain 37 (Wdr37), transcript variant 2, mRNA. (from RefSeq NM_001039388)
31	Nle1	174036	0.000000000003	chr11 82,904,589	Mus musculus notchless homolog 1 (Nle1), mRNA. (from RefSeq NM_145431)
32	Wdr82	183806	0.000000000005	chr9 106,181,033	Mus musculus WD repeat domain containing 82 (Wdr82), mRNA. (from RefSeq NM_029896)
33	Fbxw11	185426	0.00000000001	chr11 32,694,845	Mus musculus F-box and WD-40 domain protein 11 (Fbxw11), transcript variant 1, mRNA. (from RefSeq NM_134015)
34	Gnb1	176672	0.00000000002	chr4 155,525,315	Mus musculus guanine nucleotide binding protein (G protein), beta 1 (Gnb1), transcript variant 1, mRNA. (from RefSeq NM_008142)
35	Wdhd1	182425	0.00000000002	chr14 47,258,888	Mus musculus WD repeat and HMG-box DNA binding protein 1 (Wdhd1), transcript variant 1, mRNA. (from RefSeq NM_001360532)
36	Gnb4	176675	0.00000000004	chr3 32,598,458	Mus musculus guanine nucleotide binding protein (G protein), beta 4 (Gnb4), transcript variant 1, mRNA. (from RefSeq NM_013531)
37	Wdr3	n/a	0.00000000005	chr3 100,150,293	Mus musculus WD repeat domain 3 (Wdr3), transcript variant 1, mRNA. (from RefSeq NM_175552)
38	Wdr33	n/a	0.00000000009	chr18 31,855,747	Mus musculus WD repeat domain 33 (Wdr33), transcript variant 1, mRNA. (from RefSeq NM_028866)
39	Btrc	184522	0.0000000005	chr19 45,446,882	Mus musculus beta-transducin repeat containing protein (Btrc), transcript variant 3, mRNA. (from RefSeq NM_001286465)
40	Phip	319	0.0000000005	chr9 82,920,837	Mus musculus pleckstrin homology domain interacting protein (Phip), mRNA. (from RefSeq NM_001081216)
41	Cfap52	182841	0.0000000008	chr11 67,945,225	Mus musculus cilia and flagella associated protein 52 (Cfap52), mRNA. (from RefSeq NM_027963)
42	Copb2	165903	0.0000000009	chr9 98,576,056	Mus musculus coatomer protein complex, subunit beta 2 (beta prime) (Copb2), mRNA. (from RefSeq NM_015827)
43	Wdr12	188589	0.000000001	chr1 60,083,846	Mus musculus WD repeat domain 12 (Wdr12), transcript variant 2, mRNA. (from RefSeq NM_021312)
44	Ciao1	758	0.000000002	chr2 127,244,377	Mus musculus cytosolic iron-sulfur protein assembly 1 (Ciao1), mRNA. (from RefSeq NM_025296)
45	AC150683.1	n/a	0.000000002	chr7 35,257,162	AC150683.1 (from geneSymbol)
46	Gnb3	185678	0.000000004	chr6 124,837,257	Mus musculus guanine nucleotide binding protein (G protein), beta 3 (Gnb3), mRNA. (from RefSeq NM_013530)
47	Wdr48	188593	0.000000004	chr9 119,910,732	Mus musculus WD repeat domain 48 (Wdr48), mRNA. (from RefSeq NM_026236)
48	Brwd3	174369	0.000000006	chrX 108,785,682	Mus musculus bromodomain and WD repeat domain containing 3 (Brwd3), mRNA. (from RefSeq NM_001081477)
49	Nsmaf	187172	0.000000007	chr4 6,425,239	Mus musculus neutral sphingomyelinase (N-SMase) activation associated factor (Nsmaf), mRNA. (from RefSeq NM_010945)
50	Pex7	179661	0.00000001	chr10 19,880,794	Mus musculus peroxisomal biogenesis factor 7 (Pex7), transcript variant 1, mRNA. (from RefSeq NM_008822)