Mouse Gene Tgm4 (ENSMUST00000026893.5) Description and Page Index
  Description: Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA. (from RefSeq NM_177911)
Gencode Transcript: ENSMUST00000026893.5
Gencode Gene: ENSMUSG00000025787.6
Transcript (Including UTRs)
   Position: mm10 chr9:123,034,726-123,067,561 Size: 32,836 Total Exon Count: 14 Strand: +
Coding Region
   Position: mm10 chr9:123,034,810-123,066,873 Size: 32,064 Coding Exon Count: 14 

Page IndexSequence and LinksCTDRNA StructureOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2019-09-20

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr9:123,034,726-123,067,561)mRNA (may differ from genome)Protein (670 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerGeneCardsPubMed
Stanford SOURCEUniProtKBWikipedia

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -28.0084-0.333 Picture PostScript Text
3' UTR -229.10688-0.333 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologGenome BrowserNo orthologNo orthologNo orthologNo ortholog
      
      
 RGD    
 Protein Sequence    
 Alignment    

-  Descriptions from all associated GenBank mRNAs
  AK035279 - Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530008N10 product:similar to DORSAL PROSTATE PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE (EC 2.3.2.13) (DORSAL PROSTATE TRANSGLUTAMINASE) (DORSAL PROTEIN 1) (DP1) [Rattus norvegicus], full insert sequence.
AF486627 - Mus musculus experimental autoimmune prostatitis antigen 1 (Eapa1) mRNA, complete cds.
BC141297 - Mus musculus transglutaminase 4 (prostate), mRNA (cDNA clone MGC:176258 IMAGE:9055909), complete cds.
BC145622 - Mus musculus transglutaminase 4 (prostate), mRNA (cDNA clone MGC:179198 IMAGE:9054190), complete cds.

-  Other Names for This Gene
  Alternate Gene Symbols: A0A0R4J071, NM_177911, uc009sfo.1, uc009sfo.2
UCSC ID: uc009sfo.2
RefSeq Accession: NM_177911
CCDS: CCDS23653.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.