Mouse Gene Cdc6 (ENSMUST00000093937.2) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
Description: Mus musculus cell division cycle 6 (Cdc6), transcript variant 1, mRNA. (from RefSeq NM_011799)
Gencode Transcript: ENSMUST00000093937.2
Gencode Gene: ENSMUSG00000017499.15
Transcript (Including UTRs)
Position: mm10 chr11:98,908,151-98,921,893 Size: 13,743 Total Exon Count: 12 Strand: +
Coding Region
Position: mm10 chr11:98,908,252-98,921,205 Size: 12,954 Coding Exon Count: 12
Data last updated at UCSC: 2019-09-20
Sequence and Links to Tools and Databases
Primer design for this transcript
Comparative Toxicogenomics Database (CTD)
mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
LF198860 - JP 2014500723-A/6363: Polycomb-Associated Non-Coding RNAs.AK166003 - Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730029A08 product:cell division cycle 6 homolog (S. cerevisiae), full insert sequence.AK162669 - Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830165N12 product:cell division cycle 6 homolog (S. cerevisiae), full insert sequence.AK075975 - Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510042M04 product:cell division cycle 6 homolog (S. cerevisiae), full insert sequence.AK085020 - Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430025E24 product:cell division cycle 6 homolog (S. cerevisiae), full insert sequence.AK012192 - Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610529I24 product:cell division cycle 6 homolog (S. cerevisiae), full insert sequence.BC052434 - Mus musculus cell division cycle 6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:63392 IMAGE:6837113), complete cds.AJ009559 - Mus musculus mRNA for CDC6 protein.AJ223087 - Mus musculus mRNA for Cdc6-related protein.LF203920 - JP 2014500723-A/11423: Polycomb-Associated Non-Coding RNAs.LF230403 - JP 2014500723-A/37906: Polycomb-Associated Non-Coding RNAs.LF310552 - JP 2014500723-A/118055: Polycomb-Associated Non-Coding RNAs.LF230406 - JP 2014500723-A/37909: Polycomb-Associated Non-Coding RNAs.LF230407 - JP 2014500723-A/37910: Polycomb-Associated Non-Coding RNAs.LF230412 - JP 2014500723-A/37915: Polycomb-Associated Non-Coding RNAs.LF230413 - JP 2014500723-A/37916: Polycomb-Associated Non-Coding RNAs.LF230414 - JP 2014500723-A/37917: Polycomb-Associated Non-Coding RNAs.LF230415 - JP 2014500723-A/37918: Polycomb-Associated Non-Coding RNAs.LF310550 - JP 2014500723-A/118053: Polycomb-Associated Non-Coding RNAs.MA434437 - JP 2018138019-A/6363: Polycomb-Associated Non-Coding RNAs.MA439497 - JP 2018138019-A/11423: Polycomb-Associated Non-Coding RNAs.MA546129 - JP 2018138019-A/118055: Polycomb-Associated Non-Coding RNAs.MA546127 - JP 2018138019-A/118053: Polycomb-Associated Non-Coding RNAs.MA465980 - JP 2018138019-A/37906: Polycomb-Associated Non-Coding RNAs.MA465983 - JP 2018138019-A/37909: Polycomb-Associated Non-Coding RNAs.MA465984 - JP 2018138019-A/37910: Polycomb-Associated Non-Coding RNAs.MA465989 - JP 2018138019-A/37915: Polycomb-Associated Non-Coding RNAs.MA465990 - JP 2018138019-A/37916: Polycomb-Associated Non-Coding RNAs.MA465991 - JP 2018138019-A/37917: Polycomb-Associated Non-Coding RNAs.MA465992 - JP 2018138019-A/37918: Polycomb-Associated Non-Coding RNAs.
Biochemical and Signaling Pathways
KEGG - Kyoto Encyclopedia of Genes and Genomes mmu04110 - Cell cycle
BioCarta from NCI Cancer Genome Anatomy Project m_mcmPathway - CDK Regulation of DNA Replication
Other Names for This Gene
Gene Model Information
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for a detailed description of the fields of the table above.
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.