D. melanogaster Gene Uch (CG4265-RA) Description and Page Index
  Description: No description available
Transcript (Including UTRs)
   Position: dm3 chr2L:2,212,738-2,214,179 Size: 1,442 Total Exon Count: 4 Strand: -
Coding Region
   Position: dm3 chr2L:2,212,970-2,213,931 Size: 962 Coding Exon Count: 4 

Page IndexSequence and LinksMicroarray ExpressionOther SpeciesGO AnnotationsPhenotypes
SynonymsIn SitusmRNA DescriptionsOther NamesMethods
Data last updated: 2008-10-21

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2L:2,212,738-2,214,179)mRNAProtein (227 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaFlyBasePubMed
RefSeqUniProtKB

-  Microarray Expression Data
 
Expression ratio colors:

Arbeitman et al. 2002 Life-Cycle Expression Data

     
          
          
     
     
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanMouseRatZebrafishC. elegansS. cerevisiae
No orthologNo orthologNo orthologGenome BrowserGenome BrowserGenome Browser
Gene DetailsGene DetailsGene Details Gene DetailsGene Details
Gene SorterGene SorterGene Sorter Gene SorterGene Sorter
  RGDEnsemblWormBaseSGD
  Protein SequenceProtein SequenceProtein SequenceProtein Sequence
  AlignmentAlignmentAlignmentAlignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0004221 obsolete ubiquitin thiolesterase activity

Biological Process:
GO:0016579 protein deubiquitination
GO:0006508 proteolysis
GO:0006511 ubiquitin-dependent protein catabolic process

Cellular Component:
GO:0005622 intracellular


-  FlyBase Phenotypes of Various Alleles of Gene [Jan. 2006 data]
 
  • Identified via an enhancer trap element reflecting the expression in nurse cells. (Zhang et al., 1993, Dev. Biol. 157(1): 214--223)
Allele Uchf00912:
  • Phenotypic class: viable Phenotypic class: fertile (FlyBase Curators et al., 2004-, unpublished)
  • Phenotypic class: viable Phenotypic class: fertile (Bloomington Drosophila Stock Center, 2004.11.6, personal communication to FlyBase)

-  FlyBase Synonyms for Gene and Its Alleles [Jan. 2006 data]
  Symbol: Uch Name: Ubiquitin carboxy-terminal hydrolase BDGP: CG4265-RA FlyBase: FBgn0010288
Synonyms: CG4265, UBL, UCH, UCH-D, Uch+, Uchf00912, ubiquitin carboxyl terminal hydrolase, uch, uch-D

-  BDGP Expression In Situ Images
  In situ images for BDGP gene CG4265 (Uch, FlyBase gene FBgn0010288) are available from the BDGP Gene Expression project.
Number of images: 4
Number of body parts: 1
EST: GH02396
DGC Plate: UG.11
Plate position: 55

-  Descriptions from all associated GenBank mRNAs
  AF145600 - Drosophila melanogaster clone GH02396 ubiquitin carboxy-terminal hydrolase (uch) mRNA, complete cds.
X69678 - D.melanogaster mRNA for ubiquitin carboxyl terminal hydrolase.
FJ638780 - Synthetic construct Drosophila melanogaster clone BS05222 encodes Uch-RA.
FJ630147 - Synthetic construct Drosophila melanogaster clone BO05722 encodes Uch-RA.
JV215194 - TSA: Drosophila melanogaster isotig07042.Dmov mRNA sequence.
JV218035 - TSA: Drosophila melanogaster isotig00417.Dmte mRNA sequence.
KX794388 - Synthetic construct clone BS05322 Uch-RA (Uch) gene, complete cds.

-  Other Names for This Gene
  UCSC ID: CG4265-RA
RefSeq Accession: NM_057592

-  FlyBase Genes Methods, Credits, and Data Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.