C. elegans Gene mag-1 (R09B3.5) Description and Page Index
  Description: C. elegans MAG-1 protein; contains similarity to Pfam domain PF02792 Mago nashi protein contains similarity to Interpro domain IPR004023 (Mago nashi protein)
Transcript (Including UTRs)
   Position: ce6 chrI:11,912,137-11,912,666 Size: 530 Total Exon Count: 2 Strand: -
Coding Region
   Position: ce6 chrI:11,912,137-11,912,666 Size: 530 Coding Exon Count: 2 

Page IndexSequence and LinksUniProtKB CommentsProtein StructureOther SpeciesGO Annotations
mRNA DescriptionsOther NamesMethods
Data last updated: 2008-06-03

-  Sequence and Links to Tools and Databases
Genomic Sequence (chrI:11,912,137-11,912,666)mRNAProtein (152 aa)
Gene SorterGenome BrowserOther Species FASTAPubMedRefSeqUniProtKB

-  Comments and Description Text from UniProtKB
DESCRIPTION: RecName: Full=Protein mago nashi homolog; AltName: Full=Ce-mago;
FUNCTION: Involved in hermaphrodite germline sex determination. May allow oogenesis by inhibiting the function of one or more of the masculinizing genes (fog, fem, and gld) which act during the fourth larval stage to promote transient sperm production in the hermaphrodite germline.
SUBCELLULAR LOCATION: Nucleus (By similarity).
SIMILARITY: Belongs to the mago nashi family.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR004023 - Mago_nashi

Pfam Domains:
PF02792 - Mago nashi protein

ModBase Predicted Comparative 3D Structure on P49029
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanMouseRatZebrafishD. melanogasterS. cerevisiae
No orthologNo orthologGenome BrowserGenome BrowserGenome BrowserNo ortholog
Gene DetailsGene DetailsGene Details Gene Details 
Gene SorterGene SorterGene Sorter Gene Sorter 
  Protein SequenceProtein SequenceProtein Sequence 

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Biological Process:
GO:0007275 multicellular organism development
GO:0008380 RNA splicing
GO:0030154 cell differentiation
GO:0048477 oogenesis

Cellular Component:
GO:0005634 nucleus
GO:0035145 exon-exon junction complex
GO:0071013 catalytic step 2 spliceosome

-  Descriptions from all associated GenBank mRNAs
  AF007861 - Caenorhabditis elegans ce-Mago (mag-1) mRNA, partial cds.
KF051002 - Caenorhabditis elegans mago nashi protein mRNA, complete cds.

-  Other Names for This Gene
  WormBase ID: R09B3.5
RefSeq Accession: NM_060624
Protein: P49029 (aka MGN_CAEEL)

-  WormBase Genes Methods, Credits, and Data Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.