C. elegans Gene F40F9.10 (F40F9.10) Description and Page Index
  Description: contains similarity to Pfam domain PF02475 Met-10+ like-protein contains similarity to Interpro domain IPR003402 (Protein of unknown function Met10)
Transcript (Including UTRs)
   Position: ce6 chrV:9,711,435-9,713,674 Size: 2,240 Total Exon Count: 5 Strand: -
Coding Region
   Position: ce6 chrV:9,711,517-9,713,674 Size: 2,158 Coding Exon Count: 5 

Page IndexSequence and LinksProtein StructureOther SpeciesGO AnnotationsOther Names
Methods
Data last updated: 2008-06-03

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chrV:9,711,435-9,713,674)mRNAProtein (502 aa)
Gene SorterGenome BrowserOther Species FASTAPubMedRefSeqUniProtKB
WormBase

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR003402 - tRNA_Trfase_Trm5/Tyw2

Pfam Domains:
PF02475 - Met-10+ like-protein

ModBase Predicted Comparative 3D Structure on Q20240
FrontTopSide
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanMouseRatZebrafishD. melanogasterS. cerevisiae
No orthologNo orthologGenome BrowserGenome BrowserNo orthologGenome Browser
Gene DetailsGene DetailsGene Details  Gene Details
Gene SorterGene SorterGene Sorter  Gene Sorter
  RGDEnsembl SGD
  Protein SequenceProtein Sequence Protein Sequence
  AlignmentAlignment Alignment

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0016740 transferase activity

Biological Process:
GO:0008033 tRNA processing


-  Other Names for This Gene
  WormBase ID: F40F9.10
RefSeq Accession: NM_073101
Protein: Q20240

-  WormBase Genes Methods, Credits, and Data Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.