Human Gene MS4A4E (ENST00000651255.1) from GENCODE V44
Description: membrane spanning 4-domains A4E (from HGNC MS4A4E)
RefSeq Summary (NM_001351235): Most MS4A genes, including MS4A4E, encode proteins with at least 4 potential transmembrane domains and N- and C-terminal cytoplasmic domains encoded by distinct exons.[supplied by OMIM, Apr 2004].
Gencode Transcript: ENST00000651255.1
Gencode Gene: ENSG00000214787.11
Transcript (Including UTRs)
Position: hg38 chr11:60,200,270-60,243,137 Size: 42,868 Total Exon Count: 9 Strand: -
Coding Region
Position: hg38 chr11:60,201,543-60,230,055 Size: 28,513 Coding Exon Count: 8
Data last updated at UCSC: 2023-08-18 09:09:47
Sequence and Links to Tools and Databases
Primer design for this transcript
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
JD174076 - Sequence 155100 from Patent EP1572962.JD046598 - Sequence 27622 from Patent EP1572962.JD180503 - Sequence 161527 from Patent EP1572962.JD549344 - Sequence 530368 from Patent EP1572962.DQ586320 - Homo sapiens piRNA piR-53432, complete sequence.DQ586319 - Homo sapiens piRNA piR-53431, complete sequence.DQ591044 - Homo sapiens piRNA piR-58156, complete sequence.DQ591787 - Homo sapiens piRNA piR-58899, complete sequence.DQ578550 - Homo sapiens piRNA piR-46662, complete sequence.DQ581620 - Homo sapiens piRNA piR-49732, complete sequence.AK300102 - Homo sapiens cDNA FLJ59048 complete cds.DQ587480 - Homo sapiens piRNA piR-54592, complete sequence.DQ586450 - Homo sapiens piRNA piR-53562, complete sequence.DQ588169 - Homo sapiens piRNA piR-55281, complete sequence.DQ596393 - Homo sapiens piRNA piR-34459, complete sequence.DQ588544 - Homo sapiens piRNA piR-55656, complete sequence.DQ588543 - Homo sapiens piRNA piR-55655, complete sequence.JD412581 - Sequence 393605 from Patent EP1572962.JD271373 - Sequence 252397 from Patent EP1572962.AB231728 - Homo sapiens mRNA for hypothetical protein, partial cds, clone:Hsa11-digit17-05-16-R.AB231727 - Homo sapiens mRNA for hypothetical protein, partial cds, clone:Hsa11-digit17-05-12-R.AB231729 - Homo sapiens mRNA for hypothetical protein, partial sequence, clone:Hsa11-digit17-09-14-R.AB231731 - Homo sapiens mRNA for hypothetical protein, partial sequence, clone:Hsa11-digit17-11-38-R.AB231725 - Homo sapiens mRNA for hypothetical protein, partial cds, clone:Hsa11-digit17-05-01-R.AB231726 - Homo sapiens mRNA for hypothetical protein, partial cds, clone:Hsa11-digit17-05-02-R.AB231730 - Homo sapiens mRNA for hypothetical protein, partial sequence, clone:Hsa11-digit17-09-15-R.
Other Names for This Gene
Alternate Gene Symbols: A0A494C1L8, NM_001393391, uc287hca.1UCSC ID: ENST00000651255.1RefSeq Accession: NM_001351235
Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.