Human Gene LOC100287015 (uc003wqf.3) Description and Page Index
  Description: Homo sapiens uncharacterized LOC100287015 (LOC100287015), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr8:6,261,077-6,264,069 Size: 2,993 Total Exon Count: 2 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:6,261,077-6,264,069)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerH-INVLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.01 RPKM in Testis
Total median expression: 43.71 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK025595 - Homo sapiens cDNA: FLJ21942 fis, clone HEP04527.
JD441158 - Sequence 422182 from Patent EP1572962.
JD441159 - Sequence 422183 from Patent EP1572962.
JD085887 - Sequence 66911 from Patent EP1572962.
JD047711 - Sequence 28735 from Patent EP1572962.
JD238410 - Sequence 219434 from Patent EP1572962.
JD363145 - Sequence 344169 from Patent EP1572962.
JD194801 - Sequence 175825 from Patent EP1572962.
JD194802 - Sequence 175826 from Patent EP1572962.
JD537376 - Sequence 518400 from Patent EP1572962.
JD278341 - Sequence 259365 from Patent EP1572962.
BC024246 - Homo sapiens cDNA clone IMAGE:4821564.
BC036625 - Homo sapiens cDNA clone IMAGE:5288145.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_040040
UCSC ID: uc003wqf.3
RefSeq Accession: NR_040040

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_040040.1
exon count: 2CDS single in 3' UTR: no RNA size: 2408
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 84.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.