Human Gene AGAP9 (uc031puy.1)
|
|
Sequence and Links to Tools and Databases
|
|
Primer design for this transcript
|
|
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
|
|
Microarray Expression Data
|
|
Press "+" in the title bar above to open this section.
| |
|
|
Orthologous Genes in Other Species
|
|
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
|
| |
|
|
Descriptions from all associated GenBank mRNAs
|
|
BC075841 - Homo sapiens hypothetical protein LOC642517, mRNA (cDNA clone IMAGE:4865591). AK309024 - Homo sapiens cDNA, FLJ99065. BC008503 - Homo sapiens hypothetical protein LOC642826, mRNA (cDNA clone IMAGE:4296326). BC051298 - Homo sapiens hypothetical protein LOC642826, mRNA (cDNA clone IMAGE:4648334). DQ592769 - Homo sapiens piRNA piR-59881, complete sequence. AK094691 - Homo sapiens cDNA FLJ37372 fis, clone BRAMY2024728. DQ571332 - Homo sapiens piRNA piR-31444, complete sequence. JD152921 - Sequence 133945 from Patent EP1572962. JD160705 - Sequence 141729 from Patent EP1572962. JD264740 - Sequence 245764 from Patent EP1572962. DQ574799 - Homo sapiens piRNA piR-42911, complete sequence. BC041413 - Homo sapiens hypothetical protein LOC642517, mRNA (cDNA clone IMAGE:5285272). DQ585484 - Homo sapiens piRNA piR-52596, complete sequence. DQ594561 - Homo sapiens piRNA piR-60673, complete sequence.
| |
|
|
Other Names for This Gene
|
|
Alternate Gene Symbols: BMS1P6, NR_072978, uc009xnj.1 UCSC ID: uc031puy.1 RefSeq Accession: NR_024495
| |
|
|
Gene Model Information
|
|
category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_072978.1
|
exon count:
| 9 | CDS single in 3' UTR:
| no
| RNA size:
| 4704 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 304.50 | frame shift in genome:
| no
| % Coverage:
| 99.83 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 2 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
|
Click here
for a detailed description of the fields of the table above.
| |
|
|
Methods, Credits, and Use Restrictions
|
|
Click here
for details on how this gene model was made and data restrictions if any.
| |
|
|
|