The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Pfam Domains: PF12012 - Domain of unknown function (DUF3504)
ModBase Predicted Comparative 3D Structure on Q2TAL8
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Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Gene Ontology (GO) Annotations with Structured Vocabulary
Molecular Function: GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding GO:0003674 molecular_function GO:0003677 DNA binding GO:0005515 protein binding
Biological Process: GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0007010 cytoskeleton organization GO:0007275 multicellular organism development GO:0008150 biological_process GO:0022604 regulation of cell morphogenesis
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