Human Gene ADRB2 (uc003lpr.2)
  Description: Homo sapiens adrenoceptor beta 2, surface (ADRB2), mRNA.
RefSeq Summary (NM_000024): This gene encodes beta-2-adrenergic receptor which is a member of the G protein-coupled receptor superfamily. This receptor is directly associated with one of its ultimate effectors, the class C L-type calcium channel Ca(V)1.2. This receptor-channel complex also contains a G protein, an adenylyl cyclase, cAMP-dependent kinase, and the counterbalancing phosphatase, PP2A. The assembly of the signaling complex provides a mechanism that ensures specific and rapid signaling by this G protein-coupled receptor. This receptor is also a transcription regulator of the alpha-synuclein gene, and together, both genes are believed to be associated with risk of Parkinson's Disease. This gene is intronless. Different polymorphic forms, point mutations, and/or downregulation of this gene are associated with nocturnal asthma, obesity, type 2 diabetes and cardiovascular disease. [provided by RefSeq, Oct 2019].
Transcript (Including UTRs)
   Position: hg19 chr5:148,206,156-148,208,197 Size: 2,042 Total Exon Count: 1 Strand: +
Coding Region
   Position: hg19 chr5:148,206,395-148,207,636 Size: 1,242 Coding Exon Count: 1 

Page IndexSequence and LinksUniProtKB CommentsPrimersGenetic AssociationsMalaCards
CTDGene AllelesRNA-Seq ExpressionMicroarray ExpressionRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther NamesModel Information
Methods
Data last updated at UCSC: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr5:148,206,156-148,208,197)mRNA (may differ from genome)Protein (413 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneGene interactionsTable Schema
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MGIneXtProtOMIMPubMedReactomeTreefam
UniProtKBWikipediaBioGrid CRISPR DB

-  Comments and Description Text from UniProtKB
  ID: ADRB2_HUMAN
DESCRIPTION: RecName: Full=Beta-2 adrenergic receptor; AltName: Full=Beta-2 adrenoreceptor; Short=Beta-2 adrenoceptor;
FUNCTION: Beta-adrenergic receptors mediate the catecholamine- induced activation of adenylate cyclase through the action of G proteins. The beta-2-adrenergic receptor binds epinephrine with an approximately 30-fold greater affinity than it does norepinephrine.
SUBUNIT: Binds SLC9A3R1 and GPRASP1. Interacts with ARRB1 and ARRB2. Interacts with SRC, USP20 and USP33. Interacts with VHL; the interaction, which is increased on hydroxylation of ADRB2, ubiquitinates ADRB2 leading to its degradation. Interacts with EGLN3; the interaction hydroxylates ADRB2 facilitating VHL-E3 ligase-mediated ubiquitination.
SUBCELLULAR LOCATION: Cell membrane; Multi-pass membrane protein. Note=Colocalizes with VHL at the cell membrane.
PTM: Palmitoylated; may reduce accessibility of Ser-345 and Ser- 346 by anchoring Cys-341 to the plasma membrane. Agonist stimulation promotes depalmitoylation and further allows Ser-345 and Ser-346 phosphorylation.
PTM: Phosphorylated by PKA and BARK upon agonist stimulation, which mediates homologous desensitization of the receptor. PKA- mediated phosphorylation seems to facilitate phosphorylation by BARK. Phosphorylated upon DNA damage, probably by ATM or ATR.
PTM: Phosphorylation of Tyr-141 is induced by insulin and leads to supersensitization of the receptor.
PTM: Polyubiquitinated. Agonist-induced ubiquitination leads to sort internalized receptors to the lysosomes for degradation. Deubiquitination by USP20 and USP33, leads to ADRB2 recycling and resensitization after prolonged agonist stimulation. USP20 and USP33 are constitutively associated and are dissociated immediately after agonist stimulation. Ubiquitination by the VHL- E3 ligase complex is oxygen-dependent.
PTM: Hydroxylation by EGLN3 occurs only under normoxia and increases the interaction with VHL and the subsequent ubiquitination and degradation of ADRB2.
POLYMORPHISM: The Gly-16 allele is overrepresented in individuals affected by nocturnal asthma as compared to controls, and appears to be an important genetic factor in the expression of this asthmatic phenotype.
SIMILARITY: Belongs to the G-protein coupled receptor 1 family. Adrenergic receptor subfamily. ADRB2 sub-subfamily.
SEQUENCE CAUTION: Sequence=BAD96745.1; Type=Erroneous initiation; Note=Translation N-terminally shortened;
WEB RESOURCE: Name=GeneReviews; URL="http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/ADRB2";
WEB RESOURCE: Name=SeattleSNPs; URL="http://pga.gs.washington.edu/data/adrb2/";

-  Primer design for this transcript
 

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-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): ADRB2
CDC HuGE Published Literature: ADRB2
Positive Disease Associations: asthma , Asthma severity , Asthma smokers , attention deficit hyperactivity disorder , BHR , blood pressure, arterial , Body Weight , breast cancer , Bronchial asthma , cardiomyopathy; heart failure , cholesterol, LDL , colorectal cancer , Decreased airway responsiveness , diabetes, type 2 , epinephrine lung function norepinephrine , FEV1 , flow-mediated dilatation of the brachial artery , heart failure , heart rate , High total IgE , human intelligence , hypertension , hypertriglyceridemia and the development of fatty liver , Hypotension , increased body weight and dyslipoproteinaemia involving triglyceride-rich lipoproteins , interstitial cystitis , limb deficiency anomalies , metabolic syndrome , multiple sclerosis , Nocturnal asthma , obesity , Obesity and Type 2 Diabetes , Parasitic infection , PEF , persistent bronchial hyperresponsiveness , preterm delivery , pulmonary function , respiratory airway resistance , Steroid-requiring asthma in sedentary women , subcutaneous fat accumulation , weight gain
Related Studies:
  1. asthma
    Dai, L. M. et al. 2004, [Relationship between the locus 16 geontype of beta 2 adrenergic receptor and the nocturnal asthma phenotype], Sichuan da xue xue bao Yi xue ban. 2004 Jan;35(1):32-4. [PubMed 14981808]
    The Gly16 polymorphism of beta 2 AR appears to be associated with nocturnal asthma.
  2. asthma
    Gao, J. M. et al. 2002, [Association of polymorphism of human beta 2-adrenergic receptor gene and bronchial asthma], Zhongguo yi xue ke xue yuan xue bao Acta Academiae Medicinae Sinicae. 2002 Dec;24(6):626-31. [PubMed 12905693]
    Gly16 homozygous beta 2AR was associated with asthma susceptibility in Chinese patients with Han ethnic nearby Beijing region, and Gly16 homozygous beta 2AR was associated significantly with nocturnal asthma. Glu27 homozygous beta 2AR was related to hyper-bronchial reactivity of asthmatics.
  3. asthma
    Gao, G. et al. 2000, [Study on beta 2 adrenergic receptor genetic polymorphisms in asthmatics in the people of the Han nationality of northern China], Zhonghua jie he he hu xi za zhi. 2000 Feb;23(2):93-7. [PubMed 11778498]
    These results suggest that beta 2-AR 16 locus genetic polymorphism is correlated with asthma severity in the people of the Han nationality of northern China.
           more ... click here to view the complete list

-  MalaCards Disease Associations
  MalaCards Gene Search: ADRB2
Diseases sorted by gene-association score: asthma* (313), obesity* (256), asthma susceptibility, adrb2-related* (100), obesity susceptibility, adrb2-related* (41), status asthmaticus (17), ocular hypotension (10), pulmonary disease, chronic obstructive (10), pain disorder (9), perinephritis (8), whim syndrome (8), meningococcal infection (8), congestive heart failure (8), thyrotoxic periodic paralysis (7), asthenopia (6), interstitial cystitis (6), acute mountain sickness (6), aortic coarctation (5), pollen allergy (5), heart disease (5), orthostatic intolerance (5), acute insulin response (5), bronchial disease (4), hypertension, essential (4), atopy (3), cystic fibrosis (2), dilated cardiomyopathy (2), myocardial infarction (2), respiratory system disease (1)
* = Manually curated disease association

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 20.71 RPKM in Skin - Not Sun Exposed (Suprapubic)
Total median expression: 191.68 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -91.00239-0.381 Picture PostScript Text
3' UTR -137.08561-0.244 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR000276 - 7TM_GPCR_Rhodpsn
IPR000332 - Adrgc_rcpt_B2
IPR002233 - Adrnrgc_rcpt
IPR017452 - GPCR_Rhodpsn_supfam

Pfam Domains:
PF00001 - 7 transmembrane receptor (rhodopsin family)
PF10320 - Serpentine type 7TM GPCR chemoreceptor Srsx
PF10328 - Serpentine type 7TM GPCR chemoreceptor Srx
PF13853 - Olfactory receptor

SCOP Domains:
81321 - Family A G protein-coupled receptor-like

Protein Data Bank (PDB) 3-D Structure
MuPIT help
1GQ4 - X-ray MuPIT 2R4R - X-ray MuPIT 2R4S - X-ray MuPIT 2RH1 - X-ray MuPIT 3D4S - X-ray MuPIT 3KJ6 - X-ray MuPIT 3NY8 - X-ray MuPIT 3NY9 - X-ray MuPIT 3NYA - X-ray MuPIT 3P0G - X-ray MuPIT 3PDS - X-ray MuPIT 3SN6 - X-ray MuPIT


ModBase Predicted Comparative 3D Structure on P07550
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The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologGenome BrowserGenome BrowserGenome BrowserNo orthologNo ortholog
 Gene Details Gene Details  
 Gene Sorter Gene Sorter  
 RGDEnsemblFlyBase  
 Protein SequenceProtein SequenceProtein Sequence  
 AlignmentAlignmentAlignment  

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0001540 beta-amyloid binding
GO:0004871 signal transducer activity
GO:0004930 G-protein coupled receptor activity
GO:0004935 adrenergic receptor activity
GO:0004941 beta2-adrenergic receptor activity
GO:0005515 protein binding
GO:0008179 adenylate cyclase binding
GO:0015459 potassium channel regulator activity
GO:0019899 enzyme binding
GO:0042803 protein homodimerization activity
GO:0044877 macromolecular complex binding
GO:0051379 epinephrine binding
GO:0051380 norepinephrine binding

Biological Process:
GO:0001993 regulation of systemic arterial blood pressure by norepinephrine-epinephrine
GO:0002024 diet induced thermogenesis
GO:0002025 vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure
GO:0002028 regulation of sodium ion transport
GO:0002032 desensitization of G-protein coupled receptor protein signaling pathway by arrestin
GO:0006898 receptor-mediated endocytosis
GO:0006940 regulation of smooth muscle contraction
GO:0007165 signal transduction
GO:0007166 cell surface receptor signaling pathway
GO:0007171 activation of transmembrane receptor protein tyrosine kinase activity
GO:0007186 G-protein coupled receptor signaling pathway
GO:0007188 adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007190 activation of adenylate cyclase activity
GO:0007267 cell-cell signaling
GO:0008333 endosome to lysosome transport
GO:0009409 response to cold
GO:0010739 positive regulation of protein kinase A signaling
GO:0016579 protein deubiquitination
GO:0030501 positive regulation of bone mineralization
GO:0031398 positive regulation of protein ubiquitination
GO:0031649 heat generation
GO:0040015 negative regulation of multicellular organism growth
GO:0043410 positive regulation of MAPK cascade
GO:0045453 bone resorption
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0045986 negative regulation of smooth muscle contraction
GO:0050873 brown fat cell differentiation
GO:0061024 membrane organization
GO:0071875 adrenergic receptor signaling pathway
GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway
GO:0071902 positive regulation of protein serine/threonine kinase activity
GO:0097746 regulation of blood vessel diameter
GO:1901098 positive regulation of autophagosome maturation
GO:1904504 positive regulation of lipophagy
GO:1904646 cellular response to beta-amyloid
GO:1990911 response to psychosocial stress
GO:2000481 positive regulation of cAMP-dependent protein kinase activity
GO:2000969 positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Cellular Component:
GO:0005634 nucleus
GO:0005764 lysosome
GO:0005768 endosome
GO:0005769 early endosome
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0010008 endosome membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0016324 apical plasma membrane
GO:0030665 clathrin-coated vesicle membrane
GO:0043235 receptor complex


-  Descriptions from all associated GenBank mRNAs
  M15169 - Human beta-2-adrenergic receptor mRNA, complete cds.
LF212749 - JP 2014500723-A/20252: Polycomb-Associated Non-Coding RNAs.
LF211071 - JP 2014500723-A/18574: Polycomb-Associated Non-Coding RNAs.
AK313151 - Homo sapiens cDNA, FLJ93644, highly similar to Homo sapiens adrenergic, beta-2-, receptor, surface (ADRB2), mRNA.
BC012481 - Homo sapiens adrenergic, beta-2-, receptor, surface, mRNA (cDNA clone MGC:21367 IMAGE:4538187), complete cds.
AK223025 - Homo sapiens mRNA for Adrenergic, beta-2-, receptor, surface variant, clone: JTH06683.
BC073856 - Homo sapiens adrenergic, beta-2-, receptor, surface, mRNA (cDNA clone MGC:90247 IMAGE:5217922), complete cds.
BC063486 - Homo sapiens adrenergic, beta-2-, receptor, surface, mRNA (cDNA clone MGC:74793 IMAGE:5241774), complete cds.
X04827 - Human mRNA for brain beta-adrenergic receptor.
JD252938 - Sequence 233962 from Patent EP1572962.
JD097381 - Sequence 78405 from Patent EP1572962.
JD053866 - Sequence 34890 from Patent EP1572962.
AB590698 - Synthetic construct DNA, clone: pFN21AE1887, Homo sapiens ADRB2 gene for adrenergic, beta-2-, receptor, surface, without stop codon, in Flexi system.
KJ896392 - Synthetic construct Homo sapiens clone ccsbBroadEn_05786 ADRB2 gene, encodes complete protein.
KR711409 - Synthetic construct Homo sapiens clone CCSBHm_00023432 ADRB2 (ADRB2) mRNA, encodes complete protein.
KR711410 - Synthetic construct Homo sapiens clone CCSBHm_00023433 ADRB2 (ADRB2) mRNA, encodes complete protein.
KJ534762 - Homo sapiens clone ADRB2_iso-A_adult-A03 adrenoceptor beta 2 surface isoform A (ADRB2) mRNA, partial cds, alternatively spliced.
AY136741 - Homo sapiens beta 2 adrenergic receptor (ADRB2) mRNA, complete cds.
LF343739 - JP 2014500723-A/151242: Polycomb-Associated Non-Coding RNAs.
JD509513 - Sequence 490537 from Patent EP1572962.
JD079808 - Sequence 60832 from Patent EP1572962.
JD288448 - Sequence 269472 from Patent EP1572962.
JD163899 - Sequence 144923 from Patent EP1572962.
JD141446 - Sequence 122470 from Patent EP1572962.
JD163617 - Sequence 144641 from Patent EP1572962.
JD429846 - Sequence 410870 from Patent EP1572962.
JD359278 - Sequence 340302 from Patent EP1572962.
JD208045 - Sequence 189069 from Patent EP1572962.
MA579316 - JP 2018138019-A/151242: Polycomb-Associated Non-Coding RNAs.
MA448326 - JP 2018138019-A/20252: Polycomb-Associated Non-Coding RNAs.
MA446648 - JP 2018138019-A/18574: Polycomb-Associated Non-Coding RNAs.

-  Biochemical and Signaling Pathways
  KEGG - Kyoto Encyclopedia of Genes and Genomes
hsa04020 - Calcium signaling pathway
hsa04080 - Neuroactive ligand-receptor interaction
hsa04144 - Endocytosis

BioCarta from NCI Cancer Genome Anatomy Project
h_cftrPathway - Cystic fibrosis transmembrane conductance regulator (CFTR) and beta 2 adrenergic receptor (b2AR) pathway
h_plcePathway - Phospholipase C-epsilon pathway
h_gcrPathway - Corticosteroids and cardioprotection

Reactome (by CSHL, EBI, and GO)

Protein P07550 (Reactome details) participates in the following event(s):

R-HSA-8982645 GRKs bind ADRB2:Catecholamine
R-HSA-390674 Beta adrenoceptors bind catecholamines
R-HSA-5696968 USP20, USP33 deubiquitinate ADRB2
R-HSA-8852167 ADRB2:Catecholamine binds ARRB1, ARRB2
R-HSA-8982641 ADRB2:GRK complex dissociates to Phosphorylated ADRB2
R-HSA-8851797 ADRB2 in ADRB2:GRK complex is phosphorylated
R-HSA-744886 The Ligand:GPCR:Gs complex dissociates
R-HSA-8866269 ARRB bind GPCRs
R-HSA-744887 Liganded Gs-activating GPCRs bind inactive heterotrimeric Gs
R-HSA-8866283 ARBB recruits GPCRs into clathrin-coated pits
R-HSA-379044 Liganded Gs-activating GPCR acts as a GEF for Gs
R-HSA-8867756 CLASP proteins and cargo are recruited to the nascent clathrin-coated pit
R-HSA-8868071 Clathrin recruits PIK3C2A
R-HSA-8868661 Dynamin-mediated GTP hydrolysis promotes vesicle scission
R-HSA-8868648 SYNJ hydrolyze PI(4,5)P2 to PI(4)P
R-HSA-8871194 RAB5 and GAPVD1 bind AP-2
R-HSA-8868658 HSPA8-mediated ATP hydrolysis promotes vesicle uncoating
R-HSA-8868659 Clathrin recruits auxilins to the clathrin-coated vesicle
R-HSA-8868660 Auxilin recruits HSPA8:ATP to the clathrin-coated vesicle
R-HSA-8867754 F- and N- BAR domain proteins bind the clathrin-coated pit
R-HSA-8868230 SNX9 recruits components of the actin polymerizing machinery
R-HSA-8868072 Clathrin-associated PIK3C2A phosphorylates PI(4)P to PI(3,4)P2
R-HSA-8868236 BAR domain proteins recruit dynamin
R-HSA-8868651 Endophilins recruit synaptojanins to the clathrin-coated pit
R-HSA-418555 G alpha (s) signalling events
R-HSA-390696 Adrenoceptors
R-HSA-5689880 Ub-specific processing proteases
R-HSA-388396 GPCR downstream signalling
R-HSA-375280 Amine ligand-binding receptors
R-HSA-5688426 Deubiquitination
R-HSA-8856825 Cargo recognition for clathrin-mediated endocytosis
R-HSA-372790 Signaling by GPCR
R-HSA-373076 Class A/1 (Rhodopsin-like receptors)
R-HSA-597592 Post-translational protein modification
R-HSA-8856828 Clathrin-mediated endocytosis
R-HSA-162582 Signal Transduction
R-HSA-500792 GPCR ligand binding
R-HSA-392499 Metabolism of proteins
R-HSA-199991 Membrane Trafficking
R-HSA-5653656 Vesicle-mediated transport

-  Other Names for This Gene
  Alternate Gene Symbols: ADRB2R, ADRB2_HUMAN, B0LPE4, B2AR, B2R7X2, NM_000024, NP_000015, O14823, O14824, O14825, O14826, P07550, Q4JG18, Q53GA6, Q6GMT4, Q6P4D8, Q8NEQ9, Q96EC3, Q9UCZ0, Q9UCZ1, Q9UCZ2, Q9UCZ3, Q9UH95, Q9UHA1, Q9UMZ5
UCSC ID: uc003lpr.2
RefSeq Accession: NM_000024
Protein: P07550 (aka ADRB2_HUMAN or B2AR_HUMAN)
CCDS: CCDS4292.1

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: NM_000024.5
exon count: 1CDS single in 3' UTR: no RNA size: 2058
ORF size: 1242CDS single in intron: no Alignment % ID: 99.90
txCdsPredict score: 2654.00frame shift in genome: no % Coverage: 99.22
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.