Human Gene SH3GL1P2 (uc021tuf.1)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
- D015123
7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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X99660 - H.sapiens SH3GLP2 pseudogene, 5' end. X99661 - H.sapiens SH3GLP2 pseudogene, 3' end. JD226768 - Sequence 207792 from Patent EP1572962. JD497773 - Sequence 478797 from Patent EP1572962. JD115150 - Sequence 96174 from Patent EP1572962. JD377854 - Sequence 358878 from Patent EP1572962. JD476559 - Sequence 457583 from Patent EP1572962. JD188904 - Sequence 169928 from Patent EP1572962. JD393748 - Sequence 374772 from Patent EP1572962. JD312318 - Sequence 293342 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: NR_033420 UCSC ID: uc021tuf.1 RefSeq Accession: NR_033420
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Gene Model Information
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category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_033420.1
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exon count:
| 1 | CDS single in 3' UTR:
| no
| RNA size:
| 2506 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 586.50 | frame shift in genome:
| no
| % Coverage:
| 99.36 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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