Human Gene FGD5-AS1 (uc031ryp.1)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BC039246 - Homo sapiens cDNA clone IMAGE:5278517. BC042881 - Homo sapiens cDNA clone IMAGE:5294815. JD312478 - Sequence 293502 from Patent EP1572962. JD415039 - Sequence 396063 from Patent EP1572962. JD312477 - Sequence 293501 from Patent EP1572962. JD476824 - Sequence 457848 from Patent EP1572962. JD094189 - Sequence 75213 from Patent EP1572962. JD379795 - Sequence 360819 from Patent EP1572962. JD560740 - Sequence 541764 from Patent EP1572962. JD094188 - Sequence 75212 from Patent EP1572962. JD379794 - Sequence 360818 from Patent EP1572962. JD120616 - Sequence 101640 from Patent EP1572962. JD120617 - Sequence 101641 from Patent EP1572962. JD560739 - Sequence 541763 from Patent EP1572962. U80771 - Human EST clone 25267 mariner transposon Hsmar1 sequence. BC014104 - Homo sapiens cDNA clone IMAGE:3638258, partial cds. BC056913 - Homo sapiens cDNA clone IMAGE:4994524, partial cds. BC008609 - Homo sapiens, Similar to SET domain and mariner transposase fusion gene, clone IMAGE:3462102, mRNA. AK055924 - Homo sapiens cDNA FLJ31362 fis, clone NB9N41000011. AK096279 - Homo sapiens cDNA FLJ38960 fis, clone NT2RI2000263. BC092452 - Homo sapiens cDNA clone IMAGE:30325817. DQ587899 - Homo sapiens piRNA piR-55011, complete sequence. BC063441 - Homo sapiens cDNA clone IMAGE:5527329, partial cds. DQ595063 - Homo sapiens piRNA piR-61175, complete sequence. DQ595873 - Homo sapiens piRNA piR-61985, complete sequence. DQ579002 - Homo sapiens piRNA piR-47114, complete sequence.
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Other Names for This Gene
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Alternate Gene Symbols: NR_046255, uc003bzf.3 UCSC ID: uc031ryp.1 RefSeq Accession: NR_046255
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Gene Model Information
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category:
| antisense
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_046255.1
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exon count:
| 2 | CDS single in 3' UTR:
| no
| RNA size:
| 3531 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 408.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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