The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Protein Domain and Structure Information
ModBase Predicted Comparative 3D Structure on Q9Y442
Front
Top
Side
The pictures above may be empty if there is no ModBase structure for the protein. The ModBase structure frequently covers just a fragment of the protein. You may be asked to log onto ModBase the first time you click on the pictures. It is simplest after logging in to just click on the picture again to get to the specific info on that model.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Gene Ontology (GO) Annotations with Structured Vocabulary
Cellular Component: GO:0016020 membrane GO:0016021 integral component of membrane
Descriptions from all associated GenBank mRNAs
AL050256 - Novel human gene mapping to chomosome 22. JD273812 - Sequence 254836 from Patent EP1572962. JD459942 - Sequence 440966 from Patent EP1572962. JD098431 - Sequence 79455 from Patent EP1572962. JD384852 - Sequence 365876 from Patent EP1572962. JD558217 - Sequence 539241 from Patent EP1572962. JD347106 - Sequence 328130 from Patent EP1572962. JD519818 - Sequence 500842 from Patent EP1572962. JD444540 - Sequence 425564 from Patent EP1572962. JD461020 - Sequence 442044 from Patent EP1572962. JD423090 - Sequence 404114 from Patent EP1572962. AK294232 - Homo sapiens cDNA FLJ55838 complete cds. JD202955 - Sequence 183979 from Patent EP1572962. AJ704765 - Homo sapiens mRNA for hypothetical protein (C22ORF24_v1), splice variant 1. AJ704766 - Homo sapiens mRNA for hypothetical protein (C22ORF24_v2), splice variant 2. JD469892 - Sequence 450916 from Patent EP1572962. JD520245 - Sequence 501269 from Patent EP1572962. JD094905 - Sequence 75929 from Patent EP1572962. JD507899 - Sequence 488923 from Patent EP1572962. AK315264 - Homo sapiens cDNA, FLJ96273. JD040921 - Sequence 21945 from Patent EP1572962. JD374059 - Sequence 355083 from Patent EP1572962. JD315207 - Sequence 296231 from Patent EP1572962.