Human Gene LOC100287639 (uc003dro.1)
|
|
Sequence and Links to Tools and Databases
|
|
Primer design for this transcript
|
|
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
|
|
Microarray Expression Data
|
|
Press "+" in the title bar above to open this section.
| |
|
|
Orthologous Genes in Other Species
|
|
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
|
| |
|
|
Descriptions from all associated GenBank mRNAs
|
|
AK092228 - Homo sapiens cDNA FLJ34909 fis, clone NT2RI2009301, moderately similar to BIFUNCTIONAL METHYLENETETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE, MITOCHONDRIAL PRECURSOR. AX747417 - Sequence 942 from Patent EP1308459. JD145548 - Sequence 126572 from Patent EP1572962. JD308570 - Sequence 289594 from Patent EP1572962. JD511367 - Sequence 492391 from Patent EP1572962. JD366130 - Sequence 347154 from Patent EP1572962. JD310311 - Sequence 291335 from Patent EP1572962. JD561931 - Sequence 542955 from Patent EP1572962. JD189582 - Sequence 170606 from Patent EP1572962. JD092991 - Sequence 74015 from Patent EP1572962. JD385158 - Sequence 366182 from Patent EP1572962. JD423347 - Sequence 404371 from Patent EP1572962. DQ577890 - Homo sapiens piRNA piR-46002, complete sequence. JD318548 - Sequence 299572 from Patent EP1572962. JD366285 - Sequence 347309 from Patent EP1572962. JD292539 - Sequence 273563 from Patent EP1572962. JD365233 - Sequence 346257 from Patent EP1572962. JD451718 - Sequence 432742 from Patent EP1572962. JD448213 - Sequence 429237 from Patent EP1572962. JD332246 - Sequence 313270 from Patent EP1572962. JD065944 - Sequence 46968 from Patent EP1572962. JD472562 - Sequence 453586 from Patent EP1572962. JD294224 - Sequence 275248 from Patent EP1572962. JD522498 - Sequence 503522 from Patent EP1572962. JD079527 - Sequence 60551 from Patent EP1572962. JD243198 - Sequence 224222 from Patent EP1572962. JD136160 - Sequence 117184 from Patent EP1572962. JD117520 - Sequence 98544 from Patent EP1572962. JD457017 - Sequence 438041 from Patent EP1572962. JD473869 - Sequence 454893 from Patent EP1572962. JD532504 - Sequence 513528 from Patent EP1572962. JD495947 - Sequence 476971 from Patent EP1572962. JD165722 - Sequence 146746 from Patent EP1572962. JD083264 - Sequence 64288 from Patent EP1572962. JD379136 - Sequence 360160 from Patent EP1572962. JD410100 - Sequence 391124 from Patent EP1572962. JD359941 - Sequence 340965 from Patent EP1572962. JD255278 - Sequence 236302 from Patent EP1572962. JD208676 - Sequence 189700 from Patent EP1572962. JD158887 - Sequence 139911 from Patent EP1572962. JD522046 - Sequence 503070 from Patent EP1572962. JD351424 - Sequence 332448 from Patent EP1572962. JD512657 - Sequence 493681 from Patent EP1572962. JD512658 - Sequence 493682 from Patent EP1572962. JD412710 - Sequence 393734 from Patent EP1572962. JD197759 - Sequence 178783 from Patent EP1572962. JD212370 - Sequence 193394 from Patent EP1572962. JD509715 - Sequence 490739 from Patent EP1572962. JD098818 - Sequence 79842 from Patent EP1572962. JD143796 - Sequence 124820 from Patent EP1572962. JD107574 - Sequence 88598 from Patent EP1572962. JD505852 - Sequence 486876 from Patent EP1572962. JD505851 - Sequence 486875 from Patent EP1572962. JD356387 - Sequence 337411 from Patent EP1572962. JD074165 - Sequence 55189 from Patent EP1572962. JD201639 - Sequence 182663 from Patent EP1572962. JD245709 - Sequence 226733 from Patent EP1572962. JD091100 - Sequence 72124 from Patent EP1572962. JD460962 - Sequence 441986 from Patent EP1572962.
| |
|
|
Other Names for This Gene
|
|
Alternate Gene Symbols: NR_077228 UCSC ID: uc003dro.1 RefSeq Accession: NR_077228
| |
|
|
Gene Model Information
|
|
category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_077228.1
|
exon count:
| 5 | CDS single in 3' UTR:
| no
| RNA size:
| 2595 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 2.50 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
|
Click here
for a detailed description of the fields of the table above.
| |
|
|
Methods, Credits, and Use Restrictions
|
|
Click here
for details on how this gene model was made and data restrictions if any.
| |
|
|
|