Human Gene MIR5188 (uc031qkf.1)
|
|
Sequence and Links to Tools and Databases
|
|
Primer design for this transcript
|
|
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
|
|
Microarray Expression Data
|
|
Press "+" in the title bar above to open this section.
| |
|
|
Orthologous Genes in Other Species
|
|
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
|
| |
|
|
Descriptions from all associated GenBank mRNAs
|
|
LF206964 - JP 2014500723-A/14467: Polycomb-Associated Non-Coding RNAs. HZ409638 - JP 2015528002-A/2235: CHIRAL CONTROL. LG052972 - KR 1020150036642-A/2238: CHIRAL CONTROL. JD025438 - Sequence 6462 from Patent EP1572962. JD033538 - Sequence 14562 from Patent EP1572962. JD035077 - Sequence 16101 from Patent EP1572962. HZ482127 - JP 2015535430-A/2633: TERMINALLY MODIFIED RNA. HZ792058 - JP 2016504050-A/3803: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES. JC514790 - Sequence 5043 from Patent WO2014113089. LF161520 - JP 2016513950-A/1586: Oligomers with improved off-target profile. LQ072378 - Sequence 2702 from Patent EP2964234. MA645879 - JP 2017113010-A/3803: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES. MA733763 - JP 2017140048-A/2633: TERMINALLY MODIFIED RNA. MA405840 - WO 2018155427-A/614: A probe with reduced false positive binding, a method to desing the probe, and the use thereof. MA442541 - JP 2018138019-A/14467: Polycomb-Associated Non-Coding RNAs. MA802932 - JP 2018183181-A/3803: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
| |
|
|
Other Names for This Gene
|
|
Alternate Gene Symbols: NR_049820 UCSC ID: uc031qkf.1 RefSeq Accession: NR_049820
| |
|
|
Gene Model Information
|
|
category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_049820.1
|
exon count:
| 1 | CDS single in 3' UTR:
| no
| RNA size:
| 113 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 344.00 | frame shift in genome:
| no
| % Coverage:
| 100.00 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
|
Click here
for a detailed description of the fields of the table above.
| |
|
|
Methods, Credits, and Use Restrictions
|
|
Click here
for details on how this gene model was made and data restrictions if any.
| |
|
|
|