Human Gene CTD-3080P12.3 (uc003jbv.1)
|
|
Sequence and Links to Tools and Databases
|
|
Primer design for this transcript
|
|
RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
|
|
Microarray Expression Data
|
|
Press "+" in the title bar above to open this section.
| |
|
|
Orthologous Genes in Other Species
|
|
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
| | | | | |
|
| |
|
|
Descriptions from all associated GenBank mRNAs
|
|
AK091791 - Homo sapiens cDNA FLJ34472 fis, clone HLUNG2003691. AK097569 - Homo sapiens cDNA FLJ40250 fis, clone TESTI2024192. BC032469 - Homo sapiens, clone IMAGE:5209198, mRNA. JD490594 - Sequence 471618 from Patent EP1572962. JD540063 - Sequence 521087 from Patent EP1572962. JD416458 - Sequence 397482 from Patent EP1572962. JD470357 - Sequence 451381 from Patent EP1572962. JD439333 - Sequence 420357 from Patent EP1572962.
| |
|
|
Other Names for This Gene
|
|
Alternate Gene Symbols: BC032469 UCSC ID: uc003jbv.1 Representative RNA: BC032469
| |
|
|
Gene Model Information
|
|
category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| BC032469.1
|
exon count:
| 5 | CDS single in 3' UTR:
| no
| RNA size:
| 1869 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 154.00 | frame shift in genome:
| no
| % Coverage:
| 92.46 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 0 | # strange splices:
| 0 |
|
Click here
for a detailed description of the fields of the table above.
| |
|
|
Methods, Credits, and Use Restrictions
|
|
Click here
for details on how this gene model was made and data restrictions if any.
| |
|
|
|