The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
AK095404 - Homo sapiens cDNA FLJ38085 fis, clone CTONG2016505. AK292179 - Homo sapiens cDNA FLJ77170 complete cds. BC015579 - Homo sapiens cDNA clone IMAGE:4636445. BC041036 - Homo sapiens hypothetical LOC196872, mRNA (cDNA clone IMAGE:4662185). JD110701 - Sequence 91725 from Patent EP1572962. JD547973 - Sequence 528997 from Patent EP1572962. JD525584 - Sequence 506608 from Patent EP1572962. KJ901178 - Synthetic construct Homo sapiens clone ccsbBroadEn_10572 MGC23270 gene, encodes complete protein. JD149795 - Sequence 130819 from Patent EP1572962. JD060556 - Sequence 41580 from Patent EP1572962. JD251246 - Sequence 232270 from Patent EP1572962. JD336196 - Sequence 317220 from Patent EP1572962. JD268958 - Sequence 249982 from Patent EP1572962. JD525479 - Sequence 506503 from Patent EP1572962. JD171549 - Sequence 152573 from Patent EP1572962. JD315983 - Sequence 297007 from Patent EP1572962. JD457051 - Sequence 438075 from Patent EP1572962. JD443800 - Sequence 424824 from Patent EP1572962. JD189360 - Sequence 170384 from Patent EP1572962. JD115639 - Sequence 96663 from Patent EP1572962. JD459880 - Sequence 440904 from Patent EP1572962. JD490459 - Sequence 471483 from Patent EP1572962. JD468089 - Sequence 449113 from Patent EP1572962. JD338024 - Sequence 319048 from Patent EP1572962. JD409976 - Sequence 391000 from Patent EP1572962. JD194750 - Sequence 175774 from Patent EP1572962. JD537345 - Sequence 518369 from Patent EP1572962. JD448495 - Sequence 429519 from Patent EP1572962. JD144041 - Sequence 125065 from Patent EP1572962. JD230214 - Sequence 211238 from Patent EP1572962. JD257699 - Sequence 238723 from Patent EP1572962. JD352076 - Sequence 333100 from Patent EP1572962. JD269994 - Sequence 251018 from Patent EP1572962.