The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
LF211759 - JP 2014500723-A/19262: Polycomb-Associated Non-Coding RNAs. AK095633 - Homo sapiens cDNA FLJ38314 fis, clone FCBBF3022765. JD330545 - Sequence 311569 from Patent EP1572962. JD250505 - Sequence 231529 from Patent EP1572962. JD292609 - Sequence 273633 from Patent EP1572962. JD348602 - Sequence 329626 from Patent EP1572962. JD261103 - Sequence 242127 from Patent EP1572962. JD081142 - Sequence 62166 from Patent EP1572962. JD192961 - Sequence 173985 from Patent EP1572962. JD256903 - Sequence 237927 from Patent EP1572962. JD054810 - Sequence 35834 from Patent EP1572962. JD184019 - Sequence 165043 from Patent EP1572962. JD281507 - Sequence 262531 from Patent EP1572962. JD495986 - Sequence 477010 from Patent EP1572962. JD540302 - Sequence 521326 from Patent EP1572962. JD384784 - Sequence 365808 from Patent EP1572962. JD460973 - Sequence 441997 from Patent EP1572962. JD209497 - Sequence 190521 from Patent EP1572962. JD075938 - Sequence 56962 from Patent EP1572962. JD228552 - Sequence 209576 from Patent EP1572962. JD486951 - Sequence 467975 from Patent EP1572962. JD342034 - Sequence 323058 from Patent EP1572962. JD118722 - Sequence 99746 from Patent EP1572962. JD264304 - Sequence 245328 from Patent EP1572962. JD562896 - Sequence 543920 from Patent EP1572962. JD317088 - Sequence 298112 from Patent EP1572962. JD302614 - Sequence 283638 from Patent EP1572962. JD509053 - Sequence 490077 from Patent EP1572962. JD062702 - Sequence 43726 from Patent EP1572962. JD482130 - Sequence 463154 from Patent EP1572962. JD501092 - Sequence 482116 from Patent EP1572962. JD066809 - Sequence 47833 from Patent EP1572962. JD184190 - Sequence 165214 from Patent EP1572962. JD093069 - Sequence 74093 from Patent EP1572962. JD561422 - Sequence 542446 from Patent EP1572962. JD281989 - Sequence 263013 from Patent EP1572962. JD230074 - Sequence 211098 from Patent EP1572962. JD269640 - Sequence 250664 from Patent EP1572962. JD320171 - Sequence 301195 from Patent EP1572962. JD350895 - Sequence 331919 from Patent EP1572962. JD197969 - Sequence 178993 from Patent EP1572962. MA447336 - JP 2018138019-A/19262: Polycomb-Associated Non-Coding RNAs.