Human Gene SNAI3-AS1 (uc010chy.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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BX640980 - Homo sapiens mRNA; cDNA DKFZp686F23222 (from clone DKFZp686F23222). BC015583 - Homo sapiens hypothetical protein MGC23284, mRNA (cDNA clone IMAGE:4637796), partial cds. BC050404 - Homo sapiens hypothetical protein MGC23284, mRNA (cDNA clone IMAGE:5768920), partial cds. JD476272 - Sequence 457296 from Patent EP1572962. JD487667 - Sequence 468691 from Patent EP1572962. JD069352 - Sequence 50376 from Patent EP1572962. AK094837 - Homo sapiens cDNA FLJ37518 fis, clone BRCAN2004653.
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Other Names for This Gene
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Alternate Gene Symbols: NR_024402 UCSC ID: uc010chy.3 RefSeq Accession: NR_024402
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Gene Model Information
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category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| NR_024402.1
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exon count:
| 4 | CDS single in 3' UTR:
| no
| RNA size:
| 2447 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 244.00 | frame shift in genome:
| no
| % Coverage:
| 99.31 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| no
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 1747 | # strange splices:
| 0 |
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for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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