Human Gene NBR2 (uc002idf.3)
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Sequence and Links to Tools and Databases
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Primer design for this transcript
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Comparative Toxicogenomics Database (CTD)
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The following chemicals interact with this gene
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
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Microarray Expression Data
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Press "+" in the title bar above to open this section.
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Orthologous Genes in Other Species
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Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse | Rat | Zebrafish | D. melanogaster | C. elegans | S. cerevisiae |
No ortholog | No ortholog | No ortholog | No ortholog | No ortholog | No ortholog |
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Descriptions from all associated GenBank mRNAs
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CR936675 - Homo sapiens mRNA; cDNA DKFZp686F081 (from clone DKFZp686F081). U88573 - Human NBR2 mRNA, complete cds. BC107773 - Homo sapiens neighbor of BRCA1 gene 2, mRNA (cDNA clone IMAGE:6452095). BC034248 - Homo sapiens neighbor of BRCA1 gene 2, mRNA (cDNA clone IMAGE:4339497), partial cds. BC022065 - Homo sapiens neighbor of BRCA1 gene 2, mRNA (cDNA clone IMAGE:4826858), with apparent retained intron. AK310868 - Homo sapiens cDNA, FLJ17910. JD193890 - Sequence 174914 from Patent EP1572962. JD399623 - Sequence 380647 from Patent EP1572962. DQ600548 - Homo sapiens piRNA piR-38614, complete sequence. JD292986 - Sequence 274010 from Patent EP1572962. JD358948 - Sequence 339972 from Patent EP1572962. KJ902079 - Synthetic construct Homo sapiens clone ccsbBroadEn_11473 NBR2 gene, encodes complete protein. AY597810 - Homo sapiens chromosome 17 neighbor of BRCA1 gene 2 (NBR2) mRNA, complete cds, alternatively spliced. JD273793 - Sequence 254817 from Patent EP1572962. JD544619 - Sequence 525643 from Patent EP1572962. JD176921 - Sequence 157945 from Patent EP1572962. JD470624 - Sequence 451648 from Patent EP1572962. JD246322 - Sequence 227346 from Patent EP1572962.
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Other Names for This Gene
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Alternate Gene Symbols: BC034248 UCSC ID: uc002idf.3 RefSeq Accession: NR_003108
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Gene Model Information
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category:
| noncoding
| nonsense-mediated-decay:
| no
| RNA accession:
| BC034248.1
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exon count:
| 4 | CDS single in 3' UTR:
| no
| RNA size:
| 2054 |
ORF size:
| 0 | CDS single in intron:
| no
| Alignment % ID:
| 100.00 |
txCdsPredict score:
| 204.50 | frame shift in genome:
| no
| % Coverage:
| 99.37 |
has start codon:
| no
| stop codon in genome:
| no
| # of Alignments:
| 1 |
has end codon:
| no
| retained intron:
| yes
| # AT/AC introns
| 0 |
selenocysteine:
| no
| end bleed into intron:
| 1403 | # strange splices:
| 0 |
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Click here
for a detailed description of the fields of the table above.
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Methods, Credits, and Use Restrictions
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Click here
for details on how this gene model was made and data restrictions if any.
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