Human Gene AB007962 (uc001eso.1) Description and Page Index
  Description: Homo sapiens mRNA, chromosome 1 specific transcript KIAA0493.
Transcript (Including UTRs)
   Position: hg19 chr1:149,627,309-149,651,107 Size: 23,799 Total Exon Count: 7 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:149,627,309-149,651,107)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerH-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.16 RPKM in Testis
Total median expression: 0.85 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK090660 - Homo sapiens cDNA FLJ33341 fis, clone BRACE2002582.
AX746564 - Sequence 89 from Patent EP1308459.
AB007962 - Homo sapiens mRNA, chromosome 1 specific transcript KIAA0493.
JD039858 - Sequence 20882 from Patent EP1572962.
JD060095 - Sequence 41119 from Patent EP1572962.
JD052631 - Sequence 33655 from Patent EP1572962.
JD267500 - Sequence 248524 from Patent EP1572962.
JD429069 - Sequence 410093 from Patent EP1572962.
JD288050 - Sequence 269074 from Patent EP1572962.
JD504312 - Sequence 485336 from Patent EP1572962.
JD049291 - Sequence 30315 from Patent EP1572962.
JD331520 - Sequence 312544 from Patent EP1572962.
JD076764 - Sequence 57788 from Patent EP1572962.
JD264094 - Sequence 245118 from Patent EP1572962.
JD271918 - Sequence 252942 from Patent EP1572962.
JD465337 - Sequence 446361 from Patent EP1572962.
JD418958 - Sequence 399982 from Patent EP1572962.
JD259798 - Sequence 240822 from Patent EP1572962.
JD153764 - Sequence 134788 from Patent EP1572962.
JD541223 - Sequence 522247 from Patent EP1572962.
JD377660 - Sequence 358684 from Patent EP1572962.
JD165335 - Sequence 146359 from Patent EP1572962.
JD479424 - Sequence 460448 from Patent EP1572962.
JD199165 - Sequence 180189 from Patent EP1572962.
JD420633 - Sequence 401657 from Patent EP1572962.
JD260369 - Sequence 241393 from Patent EP1572962.
JD047118 - Sequence 28142 from Patent EP1572962.
JD171415 - Sequence 152439 from Patent EP1572962.
JD499913 - Sequence 480937 from Patent EP1572962.
JD087380 - Sequence 68404 from Patent EP1572962.
JD311107 - Sequence 292131 from Patent EP1572962.
JD223300 - Sequence 204324 from Patent EP1572962.
JD096304 - Sequence 77328 from Patent EP1572962.
JD239144 - Sequence 220168 from Patent EP1572962.
JD348704 - Sequence 329728 from Patent EP1572962.
JD331708 - Sequence 312732 from Patent EP1572962.
JD245360 - Sequence 226384 from Patent EP1572962.
JD297148 - Sequence 278172 from Patent EP1572962.
JD326296 - Sequence 307320 from Patent EP1572962.
JD262370 - Sequence 243394 from Patent EP1572962.
JD496724 - Sequence 477748 from Patent EP1572962.
JD137156 - Sequence 118180 from Patent EP1572962.
JD428676 - Sequence 409700 from Patent EP1572962.
JD194980 - Sequence 176004 from Patent EP1572962.
JD100288 - Sequence 81312 from Patent EP1572962.
JD114175 - Sequence 95199 from Patent EP1572962.
JD083895 - Sequence 64919 from Patent EP1572962.
JD334148 - Sequence 315172 from Patent EP1572962.
JD111293 - Sequence 92317 from Patent EP1572962.
JD292629 - Sequence 273653 from Patent EP1572962.
JD528362 - Sequence 509386 from Patent EP1572962.
JD113389 - Sequence 94413 from Patent EP1572962.
JD057611 - Sequence 38635 from Patent EP1572962.
JD251802 - Sequence 232826 from Patent EP1572962.
JD251801 - Sequence 232825 from Patent EP1572962.
JD285266 - Sequence 266290 from Patent EP1572962.
JD260112 - Sequence 241136 from Patent EP1572962.
JD509471 - Sequence 490495 from Patent EP1572962.
JD565746 - Sequence 546770 from Patent EP1572962.
JD225927 - Sequence 206951 from Patent EP1572962.
JD301257 - Sequence 282281 from Patent EP1572962.
JD036790 - Sequence 17814 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc001eso.1
Representative RNA: AB007962

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: AB007962.1
exon count: 7CDS single in 3' UTR: no RNA size: 5734
ORF size: 0CDS single in intron: no Alignment % ID: 99.34
txCdsPredict score: 190.00frame shift in genome: no % Coverage: 88.11
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.