Human Gene FAM138F (uc001aak.3) Description and Page Index
  Description: Homo sapiens family with sequence similarity 138, member F (FAM138F), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr1:34,611-36,081 Size: 1,471 Total Exon Count: 3 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:34,611-36,081)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerHGNCLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.00 RPKM in Adipose - Subcutaneous
Total median expression: 0.00 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AF346307 - Homo sapiens hypothetical protein (F379) mRNA, complete cds.
AY341950 - Homo sapiens chromosome 9 F379 retina specific protein (F379) mRNA, complete cds.
AY341952 - Homo sapiens chromosome 19 F379 retina specific protein (F379) mRNA, complete cds.
AY341953 - Homo sapiens chromosome 20 F379 retina specific protein (F379) mRNA, complete cds.
DQ786278 - Homo sapiens clone HLS_IMAGE_383823 mRNA sequence.
BC137207 - Homo sapiens family with sequence similarity 138, member F, mRNA (cDNA clone IMAGE:9021204).
KJ905121 - Synthetic construct Homo sapiens clone ccsbBroadEn_14515 FAM138A-like gene, encodes complete protein.
JD277537 - Sequence 258561 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_026820
UCSC ID: uc001aak.3
RefSeq Accession: NR_026820

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_026820.1
exon count: 3CDS single in 3' UTR: no RNA size: 1130
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 377.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 2
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.