Human Gene LOC285033 (uc002svn.3) Description and Page Index
  Description: Homo sapiens uncharacterized LOC285033 (LOC285033), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr2:96,874,154-96,908,362 Size: 34,209 Total Exon Count: 4 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:96,874,154-96,908,362)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerH-INVLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 7.48 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 166.15 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK311432 - Homo sapiens cDNA, FLJ18474.
JD129085 - Sequence 110109 from Patent EP1572962.
LF205877 - JP 2014500723-A/13380: Polycomb-Associated Non-Coding RNAs.
JD189492 - Sequence 170516 from Patent EP1572962.
JD129809 - Sequence 110833 from Patent EP1572962.
JD406574 - Sequence 387598 from Patent EP1572962.
JD366976 - Sequence 348000 from Patent EP1572962.
LF349365 - JP 2014500723-A/156868: Polycomb-Associated Non-Coding RNAs.
JD126449 - Sequence 107473 from Patent EP1572962.
AK057419 - Homo sapiens cDNA FLJ32857 fis, clone TESTI2003541.
JD311684 - Sequence 292708 from Patent EP1572962.
JD525258 - Sequence 506282 from Patent EP1572962.
JD154638 - Sequence 135662 from Patent EP1572962.
JD277389 - Sequence 258413 from Patent EP1572962.
JD206412 - Sequence 187436 from Patent EP1572962.
JD100671 - Sequence 81695 from Patent EP1572962.
JD187073 - Sequence 168097 from Patent EP1572962.
JD385979 - Sequence 367003 from Patent EP1572962.
JD420526 - Sequence 401550 from Patent EP1572962.
JD392308 - Sequence 373332 from Patent EP1572962.
JD344879 - Sequence 325903 from Patent EP1572962.
JD250242 - Sequence 231266 from Patent EP1572962.
BC101730 - Homo sapiens hypothetical protein LOC285033, mRNA (cDNA clone MGC:126779 IMAGE:8069236), complete cds.
BC101732 - Homo sapiens hypothetical protein LOC285033, mRNA (cDNA clone MGC:126781 IMAGE:8069238), complete cds.
KJ895994 - Synthetic construct Homo sapiens clone ccsbBroadEn_05388 LOC285033 gene, encodes complete protein.
JD441693 - Sequence 422717 from Patent EP1572962.
JD108062 - Sequence 89086 from Patent EP1572962.
JD108061 - Sequence 89085 from Patent EP1572962.
JD342163 - Sequence 323187 from Patent EP1572962.
JD342162 - Sequence 323186 from Patent EP1572962.
JD228152 - Sequence 209176 from Patent EP1572962.
JD308250 - Sequence 289274 from Patent EP1572962.
JD159962 - Sequence 140986 from Patent EP1572962.
JD276463 - Sequence 257487 from Patent EP1572962.
JD106850 - Sequence 87874 from Patent EP1572962.
JD075166 - Sequence 56190 from Patent EP1572962.
JD042994 - Sequence 24018 from Patent EP1572962.
JD361805 - Sequence 342829 from Patent EP1572962.
JD550889 - Sequence 531913 from Patent EP1572962.
JD312265 - Sequence 293289 from Patent EP1572962.
JD556189 - Sequence 537213 from Patent EP1572962.
JD321879 - Sequence 302903 from Patent EP1572962.
JD111398 - Sequence 92422 from Patent EP1572962.
JD501474 - Sequence 482498 from Patent EP1572962.
JD423759 - Sequence 404783 from Patent EP1572962.
MA584942 - JP 2018138019-A/156868: Polycomb-Associated Non-Coding RNAs.
MA441454 - JP 2018138019-A/13380: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_046322, uc002svn.2
UCSC ID: uc002svn.3
RefSeq Accession: NR_046322

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: no RNA accession: NR_046322.1
exon count: 4CDS single in 3' UTR: no RNA size: 2484
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 360.00frame shift in genome: no % Coverage: 99.96
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.