Human Gene FLJ40288 (uc003vrd.1) Description and Page Index
  Description: Homo sapiens uncharacterized FLJ40288 (FLJ40288), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr7:132,333,553-132,413,528 Size: 79,976 Total Exon Count: 5 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:132,333,553-132,413,528)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerH-INVLynxPubMed
Stanford SOURCETreefam

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.79 RPKM in Testis
Total median expression: 0.80 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK097607 - Homo sapiens cDNA FLJ40288 fis, clone TESTI2028098.
JD329565 - Sequence 310589 from Patent EP1572962.
JD055820 - Sequence 36844 from Patent EP1572962.
JD445833 - Sequence 426857 from Patent EP1572962.
JD102591 - Sequence 83615 from Patent EP1572962.
JD534654 - Sequence 515678 from Patent EP1572962.
JD323575 - Sequence 304599 from Patent EP1572962.
JD235638 - Sequence 216662 from Patent EP1572962.
JD044518 - Sequence 25542 from Patent EP1572962.
JD108244 - Sequence 89268 from Patent EP1572962.
JD362948 - Sequence 343972 from Patent EP1572962.
JD221420 - Sequence 202444 from Patent EP1572962.
JD264337 - Sequence 245361 from Patent EP1572962.
JD067518 - Sequence 48542 from Patent EP1572962.
JD499010 - Sequence 480034 from Patent EP1572962.
JD393910 - Sequence 374934 from Patent EP1572962.
JD162770 - Sequence 143794 from Patent EP1572962.
JD195047 - Sequence 176071 from Patent EP1572962.
JD109324 - Sequence 90348 from Patent EP1572962.
JD302395 - Sequence 283419 from Patent EP1572962.
JD189728 - Sequence 170752 from Patent EP1572962.
JD053332 - Sequence 34356 from Patent EP1572962.
JD474759 - Sequence 455783 from Patent EP1572962.
JD375209 - Sequence 356233 from Patent EP1572962.
JD470127 - Sequence 451151 from Patent EP1572962.
JD318450 - Sequence 299474 from Patent EP1572962.
JD279279 - Sequence 260303 from Patent EP1572962.
JD511700 - Sequence 492724 from Patent EP1572962.
JD096246 - Sequence 77270 from Patent EP1572962.
JD481876 - Sequence 462900 from Patent EP1572962.
JD538299 - Sequence 519323 from Patent EP1572962.
JD409549 - Sequence 390573 from Patent EP1572962.
JD370379 - Sequence 351403 from Patent EP1572962.
JD206344 - Sequence 187368 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_046323
UCSC ID: uc003vrd.1
RefSeq Accession: NR_046323

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_046323.1
exon count: 5CDS single in 3' UTR: no RNA size: 1998
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 227.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.