Human Gene BC044609 (uc003krz.3) Description and Page Index
  Description: Homo sapiens cDNA clone IMAGE:5268822.
Transcript (Including UTRs)
   Position: hg19 chr5:117,618,269-117,620,462 Size: 2,194 Total Exon Count: 2 Strand: +

Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr5:117,618,269-117,620,462)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
PubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 4.04 RPKM in Testis
Total median expression: 5.78 RPKM

View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog

-  Descriptions from all associated GenBank mRNAs
  JD073992 - Sequence 55016 from Patent EP1572962.
DQ586451 - Homo sapiens piRNA piR-53563, complete sequence.
BC036254 - Homo sapiens cDNA clone IMAGE:5268822.
BC044609 - Homo sapiens cDNA clone IMAGE:4827852.
JD113981 - Sequence 95005 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc003krz.3
Representative RNA: BC044609

-  Gene Model Information
category: noncoding nonsense-mediated-decay: no RNA accession: BC044609.1
exon count: 2CDS single in 3' UTR: no RNA size: 1223
ORF size: 0CDS single in intron: no Alignment % ID: 99.75
txCdsPredict score: 335.00frame shift in genome: no % Coverage: 98.77
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.