Human Gene PARD6G-AS1 (uc002lnx.2) Description and Page Index
  Description: Homo sapiens PARD6G antisense RNA 1 (PARD6G-AS1), transcript variant 1, non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr18:77,905,807-77,929,616 Size: 23,810 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksCTDRNA-Seq ExpressionMicroarray ExpressionOther Species
mRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr18:77,905,807-77,929,616)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerH-INVHGNCLynx
PubMedStanford SOURCE

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.89 RPKM in Testis
Total median expression: 21.68 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK056304 - Homo sapiens cDNA FLJ31742 fis, clone NT2RI2007214.
JD423005 - Sequence 404029 from Patent EP1572962.
JD054959 - Sequence 35983 from Patent EP1572962.
JD343973 - Sequence 324997 from Patent EP1572962.
JD456563 - Sequence 437587 from Patent EP1572962.
JD396773 - Sequence 377797 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_028339
UCSC ID: uc002lnx.2
RefSeq Accession: NR_028339

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_028339.1
exon count: 3CDS single in 3' UTR: no RNA size: 3352
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 594.00frame shift in genome: no % Coverage: 99.46
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.