Human Gene ANKRD20A12P (uc031pnv.1) Description and Page Index
  Description: Homo sapiens ankyrin repeat domain 20 family, member A12, pseudogene (ANKRD20A12P), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr1:142,697,421-142,713,605 Size: 16,185 Total Exon Count: 5 Strand: -


Page IndexSequence and LinksMicroarray ExpressionOther SpeciesmRNA DescriptionsOther Names
Model InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:142,697,421-142,713,605)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerH-INVHGNCLynx
PubMedStanford SOURCE

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK090412 - Homo sapiens mRNA for FLJ00310 protein.
BC043411 - Homo sapiens, clone IMAGE:6155889, mRNA.
MG828789 - Homo sapiens clone TCONS_00249851 lncRNA, complete sequence.
JD503367 - Sequence 484391 from Patent EP1572962.
JD502653 - Sequence 483677 from Patent EP1572962.
JD090288 - Sequence 71312 from Patent EP1572962.
JD324105 - Sequence 305129 from Patent EP1572962.
JD324104 - Sequence 305128 from Patent EP1572962.
JD186830 - Sequence 167854 from Patent EP1572962.
JD046746 - Sequence 27770 from Patent EP1572962.
JD407930 - Sequence 388954 from Patent EP1572962.
BC022380 - Homo sapiens ankyrin repeat domain 20 family, member A pseudogene, mRNA (cDNA clone IMAGE:4768142).
KJ904237 - Synthetic construct Homo sapiens clone ccsbBroadEn_13631 LOC375010 gene, encodes complete protein.
JD249006 - Sequence 230030 from Patent EP1572962.
JD362062 - Sequence 343086 from Patent EP1572962.
JD049733 - Sequence 30757 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_046228, uc001eix.1
UCSC ID: uc031pnv.1
RefSeq Accession: NR_046228

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: yes RNA accession: NR_046228.1
exon count: 5CDS single in 3' UTR: no RNA size: 1744
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 898.00frame shift in genome: no % Coverage: 100.00
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.