Human Gene DQ598334 (uc010vch.2) Description and Page Index
  Description: Homo sapiens piRNA piR-34797, complete sequence.
Transcript (Including UTRs)
   Position: hg19 chr16:25,081,125-25,081,154 Size: 30 Total Exon Count: 1 Strand: +

Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr16:25,081,125-25,081,154)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
PubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.48 RPKM in Testis
Total median expression: 19.51 RPKM

View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog

-  Descriptions from all associated GenBank mRNAs
  DQ596731 - Homo sapiens piRNA piR-34797, complete sequence.
DQ596732 - Homo sapiens piRNA piR-34798, complete sequence.
DQ596733 - Homo sapiens piRNA piR-34799, complete sequence.
DQ598334 - Homo sapiens piRNA piR-36400, complete sequence.

-  Other Names for This Gene
  UCSC ID: uc010vch.2
Representative RNA: DQ598334

-  Gene Model Information
category: noncoding nonsense-mediated-decay: no RNA accession: DQ598334.1
exon count: 1CDS single in 3' UTR: no RNA size: 30
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 0.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.