The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AJ617629 - Homo sapiens chromosome 4 cDNA. BC043376 - Homo sapiens hypothetical LOC550112, mRNA (cDNA clone IMAGE:5194849). AK129519 - Homo sapiens cDNA FLJ26008 fis, clone DMC08925. AK093682 - Homo sapiens cDNA FLJ36363 fis, clone THYMU2007694. DQ600856 - Homo sapiens piRNA piR-38922, complete sequence. DQ590622 - Homo sapiens piRNA piR-57734, complete sequence. DQ597502 - Homo sapiens piRNA piR-35568, complete sequence.