The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AK130860 - Homo sapiens cDNA FLJ27350 fis, clone TST04882. CR933670 - Homo sapiens mRNA; cDNA DKFZp781N0456 (from clone DKFZp781N0456). AK127070 - Homo sapiens cDNA FLJ45127 fis, clone BRAWH3036951. JD213040 - Sequence 194064 from Patent EP1572962. JD095282 - Sequence 76306 from Patent EP1572962. JD267609 - Sequence 248633 from Patent EP1572962. JD151016 - Sequence 132040 from Patent EP1572962. JD536627 - Sequence 517651 from Patent EP1572962. JD536628 - Sequence 517652 from Patent EP1572962. JD547896 - Sequence 528920 from Patent EP1572962. JD070624 - Sequence 51648 from Patent EP1572962. JD151210 - Sequence 132234 from Patent EP1572962. DQ579310 - Homo sapiens piRNA piR-47422, complete sequence.