Human Gene AK096335 (uc001nkt.1) Description and Page Index
  Description: Homo sapiens cDNA FLJ39016 fis, clone NT2RP7001532.
Transcript (Including UTRs)
   Position: hg19 chr11:57,405,849-57,420,263 Size: 14,415 Total Exon Count: 2 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr11:57,405,849-57,420,263)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerH-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 1.71 RPKM in Brain - Cerebellum
Total median expression: 21.51 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK096335 - Homo sapiens cDNA FLJ39016 fis, clone NT2RP7001532.
AK092317 - Homo sapiens cDNA FLJ34998 fis, clone OCBBF2011706.
HZ483118 - JP 2015535430-A/3624: TERMINALLY MODIFIED RNA.
HZ793049 - JP 2016504050-A/4794: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
JC515781 - Sequence 6034 from Patent WO2014113089.
LQ073369 - Sequence 3693 from Patent EP2964234.
JD196161 - Sequence 177185 from Patent EP1572962.
JD140170 - Sequence 121194 from Patent EP1572962.
JD079524 - Sequence 60548 from Patent EP1572962.
JD197084 - Sequence 178108 from Patent EP1572962.
JD208860 - Sequence 189884 from Patent EP1572962.
JD112107 - Sequence 93131 from Patent EP1572962.
JD181004 - Sequence 162028 from Patent EP1572962.
JD194613 - Sequence 175637 from Patent EP1572962.
JD194614 - Sequence 175638 from Patent EP1572962.
JD051335 - Sequence 32359 from Patent EP1572962.
JD217445 - Sequence 198469 from Patent EP1572962.
JD135669 - Sequence 116693 from Patent EP1572962.
JD135670 - Sequence 116694 from Patent EP1572962.
MA646870 - JP 2017113010-A/4794: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.
MA734754 - JP 2017140048-A/3624: TERMINALLY MODIFIED RNA.
MA803923 - JP 2018183181-A/4794: SIGNAL-SENSOR POLYNUCLEOTIDES FOR THE ALTERATION OF CELLULAR PHENOTYPES.

-  Other Names for This Gene
  UCSC ID: uc001nkt.1
Representative RNA: AK096335

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: AK096335.1
exon count: 2CDS single in 3' UTR: no RNA size: 2790
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 166.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.