Human Gene GOLGA8J (uc001zcu.2)
Description: Homo sapiens cDNA, FLJ17568.Transcript (Including UTRs) Position: hg19 chr15:30,375,894-30,380,247 Size: 4,354 Total Exon Count: 8 Strand: +Coding Region Position: hg19 chr15:30,376,051-30,380,217 Size: 4,167 Coding Exon Count: 8
Data last updated at UCSC: 2013-06-14
Sequence and Links to Tools and Databases
Primer design for this transcript
Common Gene Haplotype Alleles
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Descriptions from all associated GenBank mRNAs
AK310526 - Homo sapiens cDNA, FLJ17568.JD350469 - Sequence 331493 from Patent EP1572962.JD373072 - Sequence 354096 from Patent EP1572962.JD392484 - Sequence 373508 from Patent EP1572962.JD440167 - Sequence 421191 from Patent EP1572962.JD279674 - Sequence 260698 from Patent EP1572962.JD183490 - Sequence 164514 from Patent EP1572962.DQ582641 - Homo sapiens piRNA piR-32753, complete sequence.JD210727 - Sequence 191751 from Patent EP1572962.DQ596029 - Homo sapiens piRNA piR-34095, complete sequence.
Other Names for This Gene
Alternate Gene Symbols: AK310526UCSC ID: uc001zcu.2Representative RNA: AK310526
Gene Model Information
category:
coding
nonsense-mediated-decay:
no
RNA accession:
AK310526.1
exon count:
8 CDS single in 3' UTR:
no
RNA size:
1372 ORF size:
882 CDS single in intron:
no
Alignment % ID:
99.71 txCdsPredict score:
1421.00 frame shift in genome:
no
% Coverage:
77.92 has start codon:
yes
stop codon in genome:
no
# of Alignments:
2 has end codon:
yes
retained intron:
no
# AT/AC introns
0 selenocysteine:
no
end bleed into intron:
0 # strange splices:
0
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Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.
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