Human Gene FLJ37201 (uc010qni.1) Description and Page Index
  Description: Homo sapiens tigger transposable element derived 2 pseudogene (FLJ37201), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr10:91,451,057-91,457,685 Size: 6,629 Total Exon Count: 2 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:91,451,057-91,457,685)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerH-INVLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.85 RPKM in Pituitary
Total median expression: 7.09 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK094520 - Homo sapiens cDNA FLJ37201 fis, clone BRALZ2006560.
JD349637 - Sequence 330661 from Patent EP1572962.
JD553432 - Sequence 534456 from Patent EP1572962.
JD410562 - Sequence 391586 from Patent EP1572962.
JD564860 - Sequence 545884 from Patent EP1572962.
JD523907 - Sequence 504931 from Patent EP1572962.
JD409686 - Sequence 390710 from Patent EP1572962.
JD196625 - Sequence 177649 from Patent EP1572962.
JD250621 - Sequence 231645 from Patent EP1572962.
JD292879 - Sequence 273903 from Patent EP1572962.
JD373634 - Sequence 354658 from Patent EP1572962.
JD095344 - Sequence 76368 from Patent EP1572962.
JD313542 - Sequence 294566 from Patent EP1572962.
BC043217 - Homo sapiens tigger transposable element derived 2 pseudogene, mRNA (cDNA clone IMAGE:5295299).
JD314573 - Sequence 295597 from Patent EP1572962.
JD302548 - Sequence 283572 from Patent EP1572962.
BC104181 - Homo sapiens tigger transposable element derived 2 pseudogene, mRNA (cDNA clone IMAGE:40030790).
BC104182 - Homo sapiens tigger transposable element derived 2 pseudogene, mRNA (cDNA clone IMAGE:40030791).
BC112983 - Homo sapiens tigger transposable element derived 2 pseudogene, mRNA (cDNA clone IMAGE:40030785).
BC112984 - Homo sapiens tigger transposable element derived 2 pseudogene, mRNA (cDNA clone IMAGE:40030786).
JD360364 - Sequence 341388 from Patent EP1572962.
KJ900940 - Synthetic construct Homo sapiens clone ccsbBroadEn_10334 FLJ37201 gene, encodes complete protein.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_026835
UCSC ID: uc010qni.1
RefSeq Accession: NR_026835

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_026835.1
exon count: 2CDS single in 3' UTR: no RNA size: 3662
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 467.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.