Human Gene C21orf89 (uc002zgz.1) Description and Page Index
  Description: Homo sapiens C21orf89 protein (C21orf89) mRNA, complete cds.
Transcript (Including UTRs)
   Position: hg19 chr21:46,654,267-46,678,645 Size: 24,379 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr21:46,654,267-46,678,645)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerHPRDPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.83 RPKM in Testis
Total median expression: 7.57 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AF426268 - Homo sapiens C21orf89 protein (C21orf89) mRNA, complete cds.
JD245618 - Sequence 226642 from Patent EP1572962.
JD309533 - Sequence 290557 from Patent EP1572962.
JD467438 - Sequence 448462 from Patent EP1572962.
JD330701 - Sequence 311725 from Patent EP1572962.
JD172495 - Sequence 153519 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: AF426268
UCSC ID: uc002zgz.1
Representative RNA: AF426268

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: AF426268.1
exon count: 3CDS single in 3' UTR: no RNA size: 530
ORF size: 0CDS single in intron: no Alignment % ID: 99.62
txCdsPredict score: 293.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.