Human Gene WHAMMP1 (uc001zgr.1) Description and Page Index
  Description: Homo sapiens WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 1 (WHAMMP1), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr15:32,814,894-32,825,942 Size: 11,049 Total Exon Count: 6 Strand: -

Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr15:32,814,894-32,825,942)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblExonPrimerHGNCLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.59 RPKM in Thyroid
Total median expression: 62.83 RPKM

View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog

-  Descriptions from all associated GenBank mRNAs
  BC117556 - Homo sapiens cDNA clone IMAGE:4804281.
JD448805 - Sequence 429829 from Patent EP1572962.
JD080514 - Sequence 61538 from Patent EP1572962.
JD080649 - Sequence 61673 from Patent EP1572962.
JD154911 - Sequence 135935 from Patent EP1572962.
JD053628 - Sequence 34652 from Patent EP1572962.
JD058452 - Sequence 39476 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BC117556
UCSC ID: uc001zgr.1
RefSeq Accession: NR_036650

-  Gene Model Information
category: noncoding nonsense-mediated-decay: no RNA accession: BC117556.1
exon count: 6CDS single in 3' UTR: no RNA size: 2482
ORF size: 0CDS single in intron: no Alignment % ID: 99.70
txCdsPredict score: -184.50frame shift in genome: no % Coverage: 67.41
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 336# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.