Human Gene BC053679 (uc001ejb.3) Description and Page Index
  Description: Homo sapiens cDNA: FLJ22715 fis, clone HSI13726.
Transcript (Including UTRs)
   Position: hg19 chr1:142,803,224-142,888,797 Size: 85,574 Total Exon Count: 4 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:142,803,224-142,888,797)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.98 RPKM in Thyroid
Total median expression: 17.58 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC053679 - Homo sapiens cDNA clone IMAGE:6165535, partial cds.
BC029473 - Homo sapiens cDNA clone IMAGE:4723680, **** WARNING: chimeric clone ****.
MG828799 - Homo sapiens clone TCONS_00249939 lncRNA, complete sequence.
AK026368 - Homo sapiens cDNA: FLJ22715 fis, clone HSI13726.
DQ591578 - Homo sapiens piRNA piR-58690, complete sequence.

-  Other Names for This Gene
  UCSC ID: uc001ejb.3
Representative RNA: BC053679

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: no RNA accession: BC053679.1
exon count: 4CDS single in 3' UTR: no RNA size: 1810
ORF size: 0CDS single in intron: no Alignment % ID: 99.44
txCdsPredict score: 187.50frame shift in genome: no % Coverage: 99.23
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.