Human Gene BX647938 (uc001qwb.1) Description and Page Index
  Description: Homo sapiens mRNA; cDNA DKFZp686A1124 (from clone DKFZp686A1124).
Transcript (Including UTRs)
   Position: hg19 chr12:9,709,910-9,728,864 Size: 18,955 Total Exon Count: 12 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:9,709,910-9,728,864)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaEnsembl
ExonPrimerH-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.42 RPKM in Testis
Total median expression: 8.85 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BX647938 - Homo sapiens mRNA; cDNA DKFZp686A1124 (from clone DKFZp686A1124).
JD359018 - Sequence 340042 from Patent EP1572962.
JD545033 - Sequence 526057 from Patent EP1572962.
JD483645 - Sequence 464669 from Patent EP1572962.
JD483647 - Sequence 464671 from Patent EP1572962.
JD483646 - Sequence 464670 from Patent EP1572962.
JD409117 - Sequence 390141 from Patent EP1572962.
JD123930 - Sequence 104954 from Patent EP1572962.
JD532787 - Sequence 513811 from Patent EP1572962.
JD115159 - Sequence 96183 from Patent EP1572962.
JD098731 - Sequence 79755 from Patent EP1572962.
JD098732 - Sequence 79756 from Patent EP1572962.
JD495056 - Sequence 476080 from Patent EP1572962.
JD080885 - Sequence 61909 from Patent EP1572962.
JD102814 - Sequence 83838 from Patent EP1572962.
JD102815 - Sequence 83839 from Patent EP1572962.
DQ599803 - Homo sapiens piRNA piR-37869, complete sequence.
JD521739 - Sequence 502763 from Patent EP1572962.
JD082430 - Sequence 63454 from Patent EP1572962.
JD558109 - Sequence 539133 from Patent EP1572962.
JD553416 - Sequence 534440 from Patent EP1572962.
JD244434 - Sequence 225458 from Patent EP1572962.
JD260164 - Sequence 241188 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc001qwb.1
Representative RNA: BX647938

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: BX647938.1
exon count: 12CDS single in 3' UTR: no RNA size: 7930
ORF size: 0CDS single in intron: no Alignment % ID: 99.83
txCdsPredict score: 23.00frame shift in genome: no % Coverage: 99.16
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.