Human Gene BC043601 (uc009whk.2) Description and Page Index
  Description: Homo sapiens cDNA FLJ43771 fis, clone TESTI2049553.
Transcript (Including UTRs)
   Position: hg19 chr1:119,683,048-119,726,446 Size: 43,399 Total Exon Count: 4 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr1:119,683,048-119,726,446)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
H-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 2.14 RPKM in Ovary
Total median expression: 56.20 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK125759 - Homo sapiens cDNA FLJ43771 fis, clone TESTI2049553.
BC063600 - Homo sapiens cDNA clone IMAGE:4776852, partial cds.
BC043601 - Homo sapiens, clone IMAGE:5228040, mRNA.
BC034623 - Homo sapiens cDNA clone IMAGE:4837603.
JD177783 - Sequence 158807 from Patent EP1572962.
DQ570297 - Homo sapiens piRNA piR-30409, complete sequence.
JD256949 - Sequence 237973 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc009whk.2
Representative RNA: BC043601

-  Gene Model Information
 
category: antisense nonsense-mediated-decay: no RNA accession: BC043601.1
exon count: 4CDS single in 3' UTR: no RNA size: 2510
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 336.50frame shift in genome: no % Coverage: 98.37
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.