Human Gene SNORA21 (uc002hqz.1) Description and Page Index
  Description: Homo sapiens small nucleolar RNA, H/ACA box 21 (SNORA21), small nucleolar RNA.
Transcript (Including UTRs)
   Position: hg19 chr17:37,009,116-37,009,248 Size: 133 Total Exon Count: 1 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr17:37,009,116-37,009,248)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerGeneNetworkH-INVHGNC
LynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 465.36 RPKM in Ovary
Total median expression: 7610.48 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK095288 - Homo sapiens cDNA FLJ37969 fis, clone CTONG2009938.
AJ609436 - Homo sapiens ACA21 snoRNA gene.
DQ592938 - Homo sapiens piRNA piR-33050, complete sequence.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_002576
UCSC ID: uc002hqz.1
RefSeq Accession: NR_002576

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_002576.1
exon count: 1CDS single in 3' UTR: no RNA size: 133
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 254.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.