Human Gene VTRNA1-3 (uc011czx.1) Description and Page Index
  Description: Homo sapiens vault RNA 1-3 (VTRNA1-3), vault RNA.
Transcript (Including UTRs)
   Position: hg19 chr5:140,105,744-140,105,831 Size: 88 Total Exon Count: 1 Strand: +

Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr5:140,105,744-140,105,831)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSEnsembl
Entrez GeneExonPrimerHGNCLynxOMIMPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.46 RPKM in Cells - EBV-transformed lymphocytes
Total median expression: 0.46 RPKM

View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog

-  Descriptions from all associated GenBank mRNAs
  FM207500 - Homo sapiens small vault-associated RNA a (svRNAa gene).
FM207504 - Homo sapiens pre-small vault-associated RNA b (pre-svRNAb gene).
JB336359 - Sequence 31 from Patent EP2496607.
LP131547 - Sequence 15 from Patent EP2869828.
LP728255 - Sequence 5 from Patent EP3263704.
LQ707118 - Sequence 5 from Patent WO2018001666.
HI965632 - Sequence 917 from Patent WO2010139812.
JA401670 - Sequence 917 from Patent WO2011080318.
JA402648 - Sequence 917 from Patent WO2011080315.
JA403655 - Sequence 917 from Patent WO2011080316.
JA406286 - Sequence 917 from Patent EP2336353.
JA429812 - Sequence 917 from Patent WO2011095623.
MS834771 - Sequence 917 from Patent EP3112479.
FM207503 - Homo sapiens small vault-associated RNA b* (svRNAb* gene).

-  Other Names for This Gene
  Alternate Gene Symbols: NR_026705
UCSC ID: uc011czx.1
RefSeq Accession: NR_026705

-  Gene Model Information
category: noncoding nonsense-mediated-decay: no RNA accession: NR_026705.1
exon count: 1CDS single in 3' UTR: no RNA size: 88
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 0.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.