Human Gene LOC113386 (uc002qsa.3) Description and Page Index
  Description: Homo sapiens cDNA FLJ30306 fis, clone BRACE2003319.
Transcript (Including UTRs)
   Position: hg19 chr19:58,816,740-58,827,013 Size: 10,274 Total Exon Count: 4 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr19:58,816,740-58,827,013)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaEnsemblExonPrimer
H-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 23.95 RPKM in Pituitary
Total median expression: 791.74 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AL832049 - Homo sapiens mRNA; cDNA DKFZp313J2310 (from clone DKFZp313J2310).
BC011670 - Homo sapiens similar to envelope protein, mRNA (cDNA clone MGC:16737 IMAGE:4129886), complete cds.
AK054868 - Homo sapiens cDNA FLJ30306 fis, clone BRACE2003319.
BC010118 - Homo sapiens cDNA clone IMAGE:3833049.
JD330543 - Sequence 311567 from Patent EP1572962.
DQ581523 - Homo sapiens piRNA piR-49635, complete sequence.
AK128657 - Homo sapiens cDNA FLJ46816 fis, clone TRACH3036932.
AK126673 - Homo sapiens cDNA FLJ44718 fis, clone BRACE3022051.
AK128311 - Homo sapiens cDNA FLJ46452 fis, clone THYMU3019605.
KJ903628 - Synthetic construct Homo sapiens clone ccsbBroadEn_13022 LOC113386 gene, encodes complete protein.
DQ579926 - Homo sapiens piRNA piR-48038, complete sequence.
JD105252 - Sequence 86276 from Patent EP1572962.
JD102737 - Sequence 83761 from Patent EP1572962.
JD519185 - Sequence 500209 from Patent EP1572962.
JD171421 - Sequence 152445 from Patent EP1572962.
JD205767 - Sequence 186791 from Patent EP1572962.
JD129381 - Sequence 110405 from Patent EP1572962.
JD281851 - Sequence 262875 from Patent EP1572962.
JD126841 - Sequence 107865 from Patent EP1572962.
JD367802 - Sequence 348826 from Patent EP1572962.
JD536519 - Sequence 517543 from Patent EP1572962.
JD147249 - Sequence 128273 from Patent EP1572962.
JD244720 - Sequence 225744 from Patent EP1572962.
JD358185 - Sequence 339209 from Patent EP1572962.
JD410017 - Sequence 391041 from Patent EP1572962.
JD555675 - Sequence 536699 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BC010118
UCSC ID: uc002qsa.3
Representative RNA: BC010118

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: BC010118.2
exon count: 4CDS single in 3' UTR: no RNA size: 1395
ORF size: 0CDS single in intron: no Alignment % ID: 99.78
txCdsPredict score: 566.00frame shift in genome: no % Coverage: 96.99
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.