Human Gene ADPGK (uc002avj.1) Description and Page Index
  Description: Homo sapiens cDNA FLJ38676 fis, clone IMR322000383.
Transcript (Including UTRs)
   Position: hg19 chr15:73,074,465-73,076,667 Size: 2,203 Total Exon Count: 1 Strand: -
Coding Region
   Position: hg19 chr15:73,076,128-73,076,424 Size: 297 Coding Exon Count: 1 

Page IndexSequence and LinksGenetic AssociationsMalaCardsCTDGene Alleles
Microarray ExpressionRNA StructureOther SpeciesmRNA DescriptionsOther NamesModel Information
Methods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr15:73,074,465-73,076,667)mRNA (may differ from genome)Protein (98 aa)
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaCGAP
ExonPrimerGeneCardsHGNCLynxMGIPubMed
Stanford SOURCEWikipedia

-  Genetic Association Studies of Complex Diseases and Disorders
  Genetic Association Database (archive): ADPGK
CDC HuGE Published Literature: ADPGK
Positive Disease Associations: Body Fat Distribution
Related Studies:
  1. Body Fat Distribution
    , , . [PubMed 0]
  2. Body Fat Distribution
    , , . [PubMed 0]
  3. Body Fat Distribution
    , , . [PubMed 0]
           more ... click here to view the complete list

-  MalaCards Disease Associations
  MalaCards Gene Search: ADPGK
Diseases sorted by gene-association score: monogenic diabetes (2)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene           more ... click here to view the complete list

+  Common Gene Haplotype Alleles
  Press "+" in the title bar above to open this section.

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -94.71243-0.390 Picture PostScript Text
3' UTR -609.131663-0.366 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC044589 - Homo sapiens ADP-dependent glucokinase, mRNA (cDNA clone IMAGE:5269974).
AK075560 - Homo sapiens cDNA PSEC0260 fis, clone NT2RP3004059.
AK055526 - Homo sapiens cDNA FLJ30964 fis, clone HEART2000035, weakly similar to Transacylases.
AK095995 - Homo sapiens cDNA FLJ38676 fis, clone IMR322000383.
AK293282 - Homo sapiens cDNA FLJ55953 complete cds, highly similar to ADP-dependent glucokinase (EC 2.7.1.147).
BC006112 - Homo sapiens ADP-dependent glucokinase, mRNA (cDNA clone MGC:12975 IMAGE:3347312), complete cds.
KJ903342 - Synthetic construct Homo sapiens clone ccsbBroadEn_12736 ADPGK gene, encodes complete protein.
KJ905562 - Synthetic construct Homo sapiens clone ccsbBroadEn_15178 ADPGK gene, encodes complete protein.
EU831454 - Synthetic construct Homo sapiens clone HAIB:100066483; DKFZo008E0617 ADP-dependent glucokinase protein (ADPGK) gene, encodes complete protein.
EU831541 - Synthetic construct Homo sapiens clone HAIB:100066570; DKFZo004E0618 ADP-dependent glucokinase protein (ADPGK) gene, encodes complete protein.
CU675251 - Synthetic construct Homo sapiens gateway clone IMAGE:100019680 5' read ADPGK mRNA.
JD153336 - Sequence 134360 from Patent EP1572962.
JD259738 - Sequence 240762 from Patent EP1572962.
JD228845 - Sequence 209869 from Patent EP1572962.
JD153335 - Sequence 134359 from Patent EP1572962.
BC018074 - Homo sapiens ADP-dependent glucokinase, mRNA (cDNA clone IMAGE:4791959), complete cds.
JD406653 - Sequence 387677 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: BC018074
UCSC ID: uc002avj.1
Representative RNA: BC018074

-  Gene Model Information
 
category: coding nonsense-mediated-decay: no RNA accession: BC018074.1
exon count: 1CDS single in 3' UTR: no RNA size: 1121
ORF size: 297CDS single in intron: no Alignment % ID: 99.73
txCdsPredict score: 758.50frame shift in genome: no % Coverage: 98.75
has start codon: yes stop codon in genome: no # of Alignments: 1
has end codon: yes retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.