Human Gene AK090593 (uc003skf.1) Description and Page Index
  Description: Homo sapiens cDNA FLJ33274 fis, clone ASTRO2007962.
Transcript (Including UTRs)
   Position: hg19 chr7:1,200,128-1,205,594 Size: 5,467 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:1,200,128-1,205,594)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerH-INVPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 3.34 RPKM in Testis
Total median expression: 87.37 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AK090593 - Homo sapiens cDNA FLJ33274 fis, clone ASTRO2007962.
JD514710 - Sequence 495734 from Patent EP1572962.
JD343541 - Sequence 324565 from Patent EP1572962.
JD499518 - Sequence 480542 from Patent EP1572962.
JD424232 - Sequence 405256 from Patent EP1572962.
JD053204 - Sequence 34228 from Patent EP1572962.
JD548535 - Sequence 529559 from Patent EP1572962.
JD110695 - Sequence 91719 from Patent EP1572962.
JD141313 - Sequence 122337 from Patent EP1572962.
JD546927 - Sequence 527951 from Patent EP1572962.
JD340018 - Sequence 321042 from Patent EP1572962.
JD177815 - Sequence 158839 from Patent EP1572962.
JD525005 - Sequence 506029 from Patent EP1572962.
JD260666 - Sequence 241690 from Patent EP1572962.
JD535003 - Sequence 516027 from Patent EP1572962.
JD285915 - Sequence 266939 from Patent EP1572962.
JD369340 - Sequence 350364 from Patent EP1572962.
JD250695 - Sequence 231719 from Patent EP1572962.
JD378918 - Sequence 359942 from Patent EP1572962.
JD421021 - Sequence 402045 from Patent EP1572962.
JD368275 - Sequence 349299 from Patent EP1572962.
JD543383 - Sequence 524407 from Patent EP1572962.
JD478661 - Sequence 459685 from Patent EP1572962.
JD463910 - Sequence 444934 from Patent EP1572962.
JD148406 - Sequence 129430 from Patent EP1572962.
JD250035 - Sequence 231059 from Patent EP1572962.
JD238086 - Sequence 219110 from Patent EP1572962.
JD481339 - Sequence 462363 from Patent EP1572962.
JD540846 - Sequence 521870 from Patent EP1572962.
JD471777 - Sequence 452801 from Patent EP1572962.
JD179284 - Sequence 160308 from Patent EP1572962.
JD159687 - Sequence 140711 from Patent EP1572962.
JD211897 - Sequence 192921 from Patent EP1572962.
JD426698 - Sequence 407722 from Patent EP1572962.
JD549254 - Sequence 530278 from Patent EP1572962.
JD274920 - Sequence 255944 from Patent EP1572962.
JD474046 - Sequence 455070 from Patent EP1572962.
JD058298 - Sequence 39322 from Patent EP1572962.
JD220280 - Sequence 201304 from Patent EP1572962.
JD537342 - Sequence 518366 from Patent EP1572962.
JD455087 - Sequence 436111 from Patent EP1572962.
JD194739 - Sequence 175763 from Patent EP1572962.
JD099944 - Sequence 80968 from Patent EP1572962.
JD135932 - Sequence 116956 from Patent EP1572962.
JD135935 - Sequence 116959 from Patent EP1572962.
JD135934 - Sequence 116958 from Patent EP1572962.
JD324417 - Sequence 305441 from Patent EP1572962.
JD514888 - Sequence 495912 from Patent EP1572962.
JD472230 - Sequence 453254 from Patent EP1572962.
JD451609 - Sequence 432633 from Patent EP1572962.
JD353365 - Sequence 334389 from Patent EP1572962.
JD259891 - Sequence 240915 from Patent EP1572962.
JD261666 - Sequence 242690 from Patent EP1572962.
JD430177 - Sequence 411201 from Patent EP1572962.
JD557353 - Sequence 538377 from Patent EP1572962.
JD529182 - Sequence 510206 from Patent EP1572962.
JD169290 - Sequence 150314 from Patent EP1572962.
JD041307 - Sequence 22331 from Patent EP1572962.
JD321063 - Sequence 302087 from Patent EP1572962.
JD388212 - Sequence 369236 from Patent EP1572962.
JD361157 - Sequence 342181 from Patent EP1572962.
JD309247 - Sequence 290271 from Patent EP1572962.
JD333738 - Sequence 314762 from Patent EP1572962.
JD183819 - Sequence 164843 from Patent EP1572962.
JD091985 - Sequence 73009 from Patent EP1572962.
JD292370 - Sequence 273394 from Patent EP1572962.
JD534398 - Sequence 515422 from Patent EP1572962.
JD451469 - Sequence 432493 from Patent EP1572962.
JD318864 - Sequence 299888 from Patent EP1572962.
JD101204 - Sequence 82228 from Patent EP1572962.
JD505039 - Sequence 486063 from Patent EP1572962.
JD137989 - Sequence 119013 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc003skf.1
Representative RNA: AK090593

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: AK090593.1
exon count: 3CDS single in 3' UTR: no RNA size: 1974
ORF size: 0CDS single in intron: no Alignment % ID: 98.68
txCdsPredict score: 289.00frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.