Human Gene BMS1P6 (uc031puw.1) Description and Page Index
  Description: Homo sapiens BMS1 pseudogene 6 (BMS1P6), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr10:47,225,571-47,243,511 Size: 17,941 Total Exon Count: 9 Strand: -


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr10:47,225,571-47,243,511)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblExonPrimerGeneNetworkHGNCLynxPubMed
Stanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.04 RPKM in Testis
Total median expression: 0.23 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC075841 - Homo sapiens hypothetical protein LOC642517, mRNA (cDNA clone IMAGE:4865591).
AK309024 - Homo sapiens cDNA, FLJ99065.
BC041413 - Homo sapiens hypothetical protein LOC642517, mRNA (cDNA clone IMAGE:5285272).
JD412121 - Sequence 393145 from Patent EP1572962.
DQ594561 - Homo sapiens piRNA piR-60673, complete sequence.
DQ585484 - Homo sapiens piRNA piR-52596, complete sequence.
AK094691 - Homo sapiens cDNA FLJ37372 fis, clone BRAMY2024728.
DQ574799 - Homo sapiens piRNA piR-42911, complete sequence.
JD264740 - Sequence 245764 from Patent EP1572962.
BC051298 - Homo sapiens hypothetical protein LOC642826, mRNA (cDNA clone IMAGE:4648334).
DQ571332 - Homo sapiens piRNA piR-31444, complete sequence.
DQ592769 - Homo sapiens piRNA piR-59881, complete sequence.
BC008503 - Homo sapiens hypothetical protein LOC642826, mRNA (cDNA clone IMAGE:4296326).

-  Other Names for This Gene
  Alternate Gene Symbols: NR_072978, uc009xng.1
UCSC ID: uc031puw.1
RefSeq Accession: NR_024495

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_072978.1
exon count: 9CDS single in 3' UTR: no RNA size: 4704
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 235.50frame shift in genome: no % Coverage: 99.83
has start codon: no stop codon in genome: no # of Alignments: 2
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.