Human Gene LINC00208 (uc022arx.1) Description and Page Index
  Description: Homo sapiens long intergenic non-protein coding RNA 208 (LINC00208), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr8:11,434,044-11,438,850 Size: 4,807 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksMalaCardsCTDRNA-Seq ExpressionMicroarray Expression
Other SpeciesmRNA DescriptionsOther NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:11,434,044-11,438,850)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAGene interactionsTable SchemaBioGPS
CGAPEnsemblEntrez GeneExonPrimerHGNCLynx
PubMedStanford SOURCE

-  MalaCards Disease Associations
  MalaCards Gene Search: LINC00208
Diseases sorted by gene-association score: keratolytic winter erythema (3)

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.71 RPKM in Testis
Total median expression: 0.71 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  AJ291678 - Homo sapiens mRNA for chromosome 8 open reading frame 14 (C8orf14).
JD564665 - Sequence 545689 from Patent EP1572962.
JD304637 - Sequence 285661 from Patent EP1572962.
JD322483 - Sequence 303507 from Patent EP1572962.
JD342595 - Sequence 323619 from Patent EP1572962.
JD207083 - Sequence 188107 from Patent EP1572962.
JD146479 - Sequence 127503 from Patent EP1572962.
JD212596 - Sequence 193620 from Patent EP1572962.
JD216087 - Sequence 197111 from Patent EP1572962.
JD441901 - Sequence 422925 from Patent EP1572962.
JD500376 - Sequence 481400 from Patent EP1572962.
JD187821 - Sequence 168845 from Patent EP1572962.
JD037747 - Sequence 18771 from Patent EP1572962.
JD042533 - Sequence 23557 from Patent EP1572962.
JD541095 - Sequence 522119 from Patent EP1572962.
JD174736 - Sequence 155760 from Patent EP1572962.
JD060845 - Sequence 41869 from Patent EP1572962.
JD546023 - Sequence 527047 from Patent EP1572962.
JD259541 - Sequence 240565 from Patent EP1572962.
JD230597 - Sequence 211621 from Patent EP1572962.
JD096127 - Sequence 77151 from Patent EP1572962.
JD204767 - Sequence 185791 from Patent EP1572962.
JD479585 - Sequence 460609 from Patent EP1572962.
JD276898 - Sequence 257922 from Patent EP1572962.
JD429046 - Sequence 410070 from Patent EP1572962.
JD460094 - Sequence 441118 from Patent EP1572962.
JD300689 - Sequence 281713 from Patent EP1572962.
JD147974 - Sequence 128998 from Patent EP1572962.
JD297308 - Sequence 278332 from Patent EP1572962.
JD216653 - Sequence 197677 from Patent EP1572962.
JD266857 - Sequence 247881 from Patent EP1572962.
JD091372 - Sequence 72396 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_040035
UCSC ID: uc022arx.1
RefSeq Accession: NR_040035

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_040035.1
exon count: 3CDS single in 3' UTR: no RNA size: 1927
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 332.50frame shift in genome: no % Coverage: 100.00
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.