Human Gene LOC339298 (uc021ulo.1) Description and Page Index
  Description: Homo sapiens uncharacterized LOC339298 (LOC339298), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr18:73,834,953-73,857,210 Size: 22,258 Total Exon Count: 6 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr18:73,834,953-73,857,210)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.70 RPKM in Testis
Total median expression: 0.71 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC043002 - Homo sapiens hypothetical protein LOC339298, mRNA (cDNA clone IMAGE:5297452).
JD292728 - Sequence 273752 from Patent EP1572962.
JD073652 - Sequence 54676 from Patent EP1572962.
JD087416 - Sequence 68440 from Patent EP1572962.
JD289086 - Sequence 270110 from Patent EP1572962.
JD302623 - Sequence 283647 from Patent EP1572962.
JD316465 - Sequence 297489 from Patent EP1572962.
JD350356 - Sequence 331380 from Patent EP1572962.
JD434609 - Sequence 415633 from Patent EP1572962.
JD367930 - Sequence 348954 from Patent EP1572962.
JD322466 - Sequence 303490 from Patent EP1572962.
JD433268 - Sequence 414292 from Patent EP1572962.
JD489677 - Sequence 470701 from Patent EP1572962.
JD036549 - Sequence 17573 from Patent EP1572962.
JD064675 - Sequence 45699 from Patent EP1572962.
JD293467 - Sequence 274491 from Patent EP1572962.
JD108094 - Sequence 89118 from Patent EP1572962.
JD480460 - Sequence 461484 from Patent EP1572962.
JD311898 - Sequence 292922 from Patent EP1572962.
JD346381 - Sequence 327405 from Patent EP1572962.
JD466366 - Sequence 447390 from Patent EP1572962.
JD183308 - Sequence 164332 from Patent EP1572962.
JD285376 - Sequence 266400 from Patent EP1572962.
JD328775 - Sequence 309799 from Patent EP1572962.
JD313454 - Sequence 294478 from Patent EP1572962.
JD337452 - Sequence 318476 from Patent EP1572962.
JD075251 - Sequence 56275 from Patent EP1572962.
JD290704 - Sequence 271728 from Patent EP1572962.
JD444231 - Sequence 425255 from Patent EP1572962.
JD271508 - Sequence 252532 from Patent EP1572962.
JD434297 - Sequence 415321 from Patent EP1572962.
JD257609 - Sequence 238633 from Patent EP1572962.
JD507494 - Sequence 488518 from Patent EP1572962.
JD166341 - Sequence 147365 from Patent EP1572962.
JD407240 - Sequence 388264 from Patent EP1572962.
JD161091 - Sequence 142115 from Patent EP1572962.
JD137448 - Sequence 118472 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_040034
UCSC ID: uc021ulo.1
RefSeq Accession: NR_040034

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_040034.1
exon count: 6CDS single in 3' UTR: no RNA size: 2809
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: -58.00frame shift in genome: no % Coverage: 99.47
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.