Human Gene LOC286135 (uc003xhq.4) Description and Page Index
  Description: Homo sapiens uncharacterized LOC286135 (LOC286135), non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr8:29,779,029-29,811,123 Size: 32,095 Total Exon Count: 3 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr8:29,779,029-29,811,123)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerGeneNetworkH-INVLynx
PubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.67 RPKM in Testis
Total median expression: 0.67 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC126344 - Homo sapiens cDNA clone IMAGE:8992060.
BC028745 - Homo sapiens hypothetical protein LOC286135, mRNA (cDNA clone IMAGE:4829007).
BC045833 - Homo sapiens hypothetical protein LOC286135, mRNA (cDNA clone IMAGE:4836982).
JD050957 - Sequence 31981 from Patent EP1572962.
JD178752 - Sequence 159776 from Patent EP1572962.
JD251443 - Sequence 232467 from Patent EP1572962.
JD108371 - Sequence 89395 from Patent EP1572962.
JD342975 - Sequence 323999 from Patent EP1572962.
JD361788 - Sequence 342812 from Patent EP1572962.
JD519357 - Sequence 500381 from Patent EP1572962.
JD253641 - Sequence 234665 from Patent EP1572962.
AL833525 - Homo sapiens mRNA; cDNA DKFZp686I2037 (from clone DKFZp686I2037).
JD250666 - Sequence 231690 from Patent EP1572962.
JD564876 - Sequence 545900 from Patent EP1572962.
JD053298 - Sequence 34322 from Patent EP1572962.
JD103332 - Sequence 84356 from Patent EP1572962.
JD202216 - Sequence 183240 from Patent EP1572962.
JD237843 - Sequence 218867 from Patent EP1572962.
JD454777 - Sequence 435801 from Patent EP1572962.
JD320798 - Sequence 301822 from Patent EP1572962.
JD049334 - Sequence 30358 from Patent EP1572962.
JD168974 - Sequence 149998 from Patent EP1572962.
JD445625 - Sequence 426649 from Patent EP1572962.
JD080891 - Sequence 61915 from Patent EP1572962.
JD375324 - Sequence 356348 from Patent EP1572962.
JD564742 - Sequence 545766 from Patent EP1572962.
JD449178 - Sequence 430202 from Patent EP1572962.
JD118745 - Sequence 99769 from Patent EP1572962.
JD378427 - Sequence 359451 from Patent EP1572962.
JD205725 - Sequence 186749 from Patent EP1572962.
JD533337 - Sequence 514361 from Patent EP1572962.
JD467672 - Sequence 448696 from Patent EP1572962.
JD428962 - Sequence 409986 from Patent EP1572962.
JD329477 - Sequence 310501 from Patent EP1572962.
JD037906 - Sequence 18930 from Patent EP1572962.
JD350446 - Sequence 331470 from Patent EP1572962.
JD064366 - Sequence 45390 from Patent EP1572962.
JD430567 - Sequence 411591 from Patent EP1572962.
JD459952 - Sequence 440976 from Patent EP1572962.
JD147939 - Sequence 128963 from Patent EP1572962.
JD281709 - Sequence 262733 from Patent EP1572962.
JD429490 - Sequence 410514 from Patent EP1572962.
JD186365 - Sequence 167389 from Patent EP1572962.
JD178786 - Sequence 159810 from Patent EP1572962.
JD234624 - Sequence 215648 from Patent EP1572962.
JD219220 - Sequence 200244 from Patent EP1572962.
JD315318 - Sequence 296342 from Patent EP1572962.
JD350070 - Sequence 331094 from Patent EP1572962.
JD313640 - Sequence 294664 from Patent EP1572962.
JD124039 - Sequence 105063 from Patent EP1572962.
JD155590 - Sequence 136614 from Patent EP1572962.
JD330616 - Sequence 311640 from Patent EP1572962.
JD436875 - Sequence 417899 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_024473
UCSC ID: uc003xhq.4
RefSeq Accession: NR_024473

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_024473.1
exon count: 3CDS single in 3' UTR: no RNA size: 2842
ORF size: 0CDS single in intron: no Alignment % ID: 99.96
txCdsPredict score: 360.50frame shift in genome: no % Coverage: 99.93
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.