Human Gene LOC283914 (uc002edw.3) Description and Page Index
  Description: Homo sapiens uncharacterized LOC283914 (LOC283914), transcript variant 1, non-coding RNA.
Transcript (Including UTRs)
   Position: hg19 chr16:34,597,902-34,624,955 Size: 27,054 Total Exon Count: 9 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr16:34,597,902-34,624,955)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaBioGPSCGAP
EnsemblEntrez GeneExonPrimerLynxPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 0.65 RPKM in Testis
Total median expression: 0.69 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC038774 - Homo sapiens cDNA clone IMAGE:5271062.
BC045579 - Homo sapiens cDNA clone IMAGE:4837572.
JD419839 - Sequence 400863 from Patent EP1572962.
JD304277 - Sequence 285301 from Patent EP1572962.
JD160102 - Sequence 141126 from Patent EP1572962.
JD543107 - Sequence 524131 from Patent EP1572962.
JD478441 - Sequence 459465 from Patent EP1572962.
JD463668 - Sequence 444692 from Patent EP1572962.
JD065787 - Sequence 46811 from Patent EP1572962.
JD374628 - Sequence 355652 from Patent EP1572962.
JD442839 - Sequence 423863 from Patent EP1572962.
JD235933 - Sequence 216957 from Patent EP1572962.
JD564681 - Sequence 545705 from Patent EP1572962.
JD291578 - Sequence 272602 from Patent EP1572962.
JD179437 - Sequence 160461 from Patent EP1572962.
JD190338 - Sequence 171362 from Patent EP1572962.
JD136607 - Sequence 117631 from Patent EP1572962.
JD435933 - Sequence 416957 from Patent EP1572962.
JD546316 - Sequence 527340 from Patent EP1572962.
JD221915 - Sequence 202939 from Patent EP1572962.
JD455129 - Sequence 436153 from Patent EP1572962.
JD537436 - Sequence 518460 from Patent EP1572962.
JD348529 - Sequence 329553 from Patent EP1572962.
JD237457 - Sequence 218481 from Patent EP1572962.
JD498271 - Sequence 479295 from Patent EP1572962.
JD213809 - Sequence 194833 from Patent EP1572962.
JD073241 - Sequence 54265 from Patent EP1572962.
JD051520 - Sequence 32544 from Patent EP1572962.
JD067236 - Sequence 48260 from Patent EP1572962.
JD091029 - Sequence 72053 from Patent EP1572962.
JD177369 - Sequence 158393 from Patent EP1572962.
JD096505 - Sequence 77529 from Patent EP1572962.

-  Other Names for This Gene
  Alternate Gene Symbols: NR_027079
UCSC ID: uc002edw.3
RefSeq Accession: NR_027079

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: NR_027079.1
exon count: 9CDS single in 3' UTR: no RNA size: 2804
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 41.00frame shift in genome: no % Coverage: 99.89
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.