Human Gene BC090058 (uc003ufr.3) Description and Page Index
  Description: Homo sapiens cDNA clone IMAGE:5165566.
Transcript (Including UTRs)
   Position: hg19 chr7:76,178,658-76,182,447 Size: 3,790 Total Exon Count: 2 Strand: +


Page IndexSequence and LinksRNA-Seq ExpressionMicroarray ExpressionOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated: 2013-06-14

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr7:76,178,658-76,182,447)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTATable SchemaCGAPEnsembl
ExonPrimerPubMedStanford SOURCE

-  RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
  Highest median expression: 6.68 RPKM in Testis
Total median expression: 131.12 RPKM



View in GTEx track of Genome Browser    View at GTEx portal     View GTEx Body Map

+  Microarray Expression Data
  Press "+" in the title bar above to open this section.

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
MouseRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog
      
      
      
      
      

-  Descriptions from all associated GenBank mRNAs
  BC090058 - Homo sapiens cDNA clone IMAGE:5165566.
BC078169 - Homo sapiens hypothetical LOC554248, mRNA (cDNA clone MGC:87732 IMAGE:5768316), complete cds.
JD192089 - Sequence 173113 from Patent EP1572962.
JD408149 - Sequence 389173 from Patent EP1572962.
JD538130 - Sequence 519154 from Patent EP1572962.
JD216936 - Sequence 197960 from Patent EP1572962.
JD023544 - Sequence 4568 from Patent EP1572962.
JD034161 - Sequence 15185 from Patent EP1572962.
JD506038 - Sequence 487062 from Patent EP1572962.
JD506039 - Sequence 487063 from Patent EP1572962.
JD060994 - Sequence 42018 from Patent EP1572962.
JD552411 - Sequence 533435 from Patent EP1572962.

-  Other Names for This Gene
  UCSC ID: uc003ufr.3
Representative RNA: BC090058

-  Gene Model Information
 
category: noncoding nonsense-mediated-decay: no RNA accession: BC090058.1
exon count: 2CDS single in 3' UTR: no RNA size: 2003
ORF size: 0CDS single in intron: no Alignment % ID: 100.00
txCdsPredict score: 391.00frame shift in genome: no % Coverage: 98.80
has start codon: no stop codon in genome: no # of Alignments: 1
has end codon: no retained intron: no # AT/AC introns 0
selenocysteine: no end bleed into intron: 0# strange splices: 0
Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.